G44223


Basic Information

Item Value
gene id G44223
gene name NA
gene type non-coding
species grasscarp (Ctenopharyngodon idella)
category of species economic fish

Chromosome Information

Item Value
chromosome id CI01000006
NCBI id null
chromosome length 13024002
location 5433432 ~ 5433829 (-)
genome version v1_2015/06_NatureGenetics_grasscarp_Genome

Sequence

>TU50219
AAAGAATCCTGCGCAATAGAATGTTAAGAAAGAACTTTTTAATAGCATCTTTGATTTCAGCTTAAAGGGTTAGTTCACCCAAAAATGAAAATTCTGTCATTTATTACTCACCCTCATGGCGTTCCACACCCGTAAGACCTTCGTTAATCTTCGGAACACAAATTAAGATATTTTTGTTGAAATCCGATGGCTCAGTGAGGCCTACATAGCCAGCAATGACATTTCCTCTCTCAAGATCCATTAATGTACTAAAAACATATTTAAATCAGTTCATGTGAGTACAGTGGTTCAATATTAATATTATAAAGCGACGAGAATATTTTTGGTGCTGCAAAAAAAACAAAATAACGACTTATATAGTGATGGCTGATTTCAAAACACTGCCACACTGAGGCCAC

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU50219 True 398 lncRNA 0.35 1 5433432 5433829

Neighbor

gene id symbol gene type direction distance location
CI01000006_05319715_05320035 NA coding downstream 113157 5319069 ~ 5320275 (-)
CI01000006_05264663_05267612 NA coding downstream 165559 5264119 ~ 5267873 (-)
CI01000006_05096922_05124527 CADM1A, CADM1B, CADM1 coding downstream 308905 5096922 ~ 5124527 (-)
CI01000006_05050241_05081653 NA coding downstream 351530 5049642 ~ 5081902 (-)
CI01000006_04987990_04988532 ANC13, ANAPC13.2.L, ANAPC13, ANAPC13.1 coding downstream 444900 4987819 ~ 4988879 (-)
CI01000006_05448821_05457372 NA coding upstream 14797 5448626 ~ 5458709 (-)
CI01000006_05511463_05544650 NA coding upstream 77335 5511164 ~ 5544702 (-)
CI01000006_05765933_05767517 NA coding upstream 331941 5765770 ~ 5767955 (-)
CI01000006_05779467_05807100 NA coding upstream 345385 5779011 ~ 5807580 (-)
CI01000006_05850448_05859387 HTR3A coding upstream 416398 5850227 ~ 5860193 (-)
G43860 NA non-coding downstream 60110 5373096 ~ 5373322 (-)
G43773 NA non-coding downstream 407534 5023211 ~ 5025898 (-)
G43769 NA non-coding downstream 440594 4990468 ~ 4992838 (-)
G44229 NA non-coding upstream 9578 5443407 ~ 5443774 (-)
G44292 NA non-coding upstream 120244 5554073 ~ 5557029 (-)
G44234 NA non-coding upstream 210605 5644434 ~ 5677023 (-)
G44235 NA non-coding upstream 250256 5684085 ~ 5684561 (-)
G44343 NA non-coding upstream 251551 5685380 ~ 5686568 (-)
CI01000006_04560607_04560993 NA other downstream 871364 4559509 ~ 4562068 (-)
G43549 NA other downstream 1078004 4352510 ~ 4355428 (-)
G43102 NA other downstream 2499448 2908451 ~ 2933984 (-)
CI01000006_02624725_02626124 COX8A other downstream 2807246 2624436 ~ 2626776 (-)
G42934 NA other downstream 2851226 2523776 ~ 2582206 (-)
CI01000006_06974359_06976736 NA other upstream 1539395 6973224 ~ 6976872 (-)
CI01000006_07500281_07507754 NA other upstream 2069316 7500246 ~ 7507976 (-)
CI01000006_10453630_10483241 NA other upstream 5049027 10453613 ~ 10484006 (-)
G47658 NA other upstream 5597082 11030911 ~ 11033127 (-)
CI01000006_11651067_11653761 SMD3, SNRPD3, SNRPD3L, MGC52856 other upstream 6216534 11650363 ~ 11654424 (-)

Expression


Co-expression Network