CI01000006_04883687_04890017


Basic Information

Item Value
gene id CI01000006_04883687_04890017
gene name NA
gene type coding
species grasscarp (Ctenopharyngodon idella)
category of species economic fish

Chromosome Information

Item Value
chromosome id CI01000006
NCBI id null
chromosome length 13024002
location 4883376 ~ 4890557 (-)
genome version v1_2015/06_NatureGenetics_grasscarp_Genome

Sequence

>CI01000006_04883687_04890017.mRNA
ACCTGCTCTGCAGTGGTGGCTGTGACAAGGGATGTTGAAGAGTGGGAGGGGCTTGTGCGGTCTTGCAGAATCATTAAGAATAAGTTGTCGGAACAAGCCAATTGAGAATTGATGCCACGGGCCAAATTTAAACAGAAACTAAAATATAAAATAACAATTTTAAAAAATGTCTTGCAAAAAGGGCACTTGTCTAGTTAGAGGCCAAAAGGGCAGGTGCTTGAGCACCACTTGGGGTCTATCTGCCTGCTTGCTGAATAAAAGTATTGATTCTTTCAAATGATGATACTTGATGATTCTTTTCTGAAATAAGTTAATAAGATTATTAATGTATATTGTGTCATATTAAAGACAGAATGAAGCCCATTAGTCCTGAGAAACCAGATTCACTTCTGCAGGTTTGTGATGGCAAAACATGATGAGTAGCACATAGTCGTCACATCAGTCAGCAGGCGCTTGCGCTAACACAAGTGTTTTGAGCTGAGTATTCACAATGGTTAATGAAACCACACTGCAAAGTGCTTAGAACGCTTCTCTCTCACCATGACATGTACAGACAGACAAAGTGCTTTAAAAGCTAAACACAAACAGAGATTCAAGGCCATTAACACAAACTCACATTATCAGCCACTAATGTACGTGAAGAGAGAAAAACAGAATAAGAAATACAGACAGCAATGTTCTTTGATATTTCAATGCGAAGAATTTCCTCATTTCACAGAGCAGTGTGATGATGACCTAAAGGCATTCACCAAAAAAAAGAAAACACTGTGTTACAAAAATTATTTCAATATGAGAACTTTGCTGTGTGAAGACGTTGCTTTGGACCAGACCGCAGAAAGCCAGCCGAGAAACCCGGTGCCAGAGAGTCGCATCGTGAAATTACGAGATTTAAACGAAAAAGACCGAAAAGTCCACACGAAACTCGATTGTGCTGCAGAAACTGAACTTAAGAGAGATGAAATTATGAAGACCTATCACGTATGTGACGTCCATTTTAATGTCTCCGAATATATGAAGAGTGATGTGCTGTCTTGTCGGCTGAGCCACGCGTACCGCCACTTGCCACAGAGACTTCGGTTCCACATTCAAAAGCGTGACCGCGCAGTGGTGTTCCATGCGCGTCACCGTGACCACATAAGTGCGATTGGCGCAGAAGTCCAGCTGATTTTATCAGGGCACTGTATCGTTAATCCTTTCCTCTTTTATGAGTATTTCTTGTTAGGGCTCGATGTATGACTTTTTAGGATCGTTAAATTGTCGCACGGTGCTCATTCTCTTAAAATATTGACGCTCAAGAGCAGTCAGTCTCTGATTGTTACTGTACACATTAATTATGCAAGACTTCACATAGCCTACATTGGTCCCATAGTATAATATTTTCAAGTAAGTATAAATCATGATCGTAATAGCCTACTACAGAAAATGTATTACACTTGCAGCACTGTATTAGGCCTATCCGTAGGCAACTGTAACAAATTGAGCAAATCTAACACACAAAACACTGATTCTTGAGTACTGGGACCAAATGGGCAAAATCCTGAAATAAA

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
CI01000006_04883687_04890017.mRNA True 1547 mRNA 0.40 5 4883376 4890557

Neighbor

gene id symbol gene type direction distance location
CI01000006_04645532_04679353 JAM3 coding downstream 203822 4645488 ~ 4679554 (-)
CI01000006_04633525_04639618 NA coding downstream 243758 4633423 ~ 4639618 (-)
CI01000006_04603018_04626532 DIXDC1B, DIXDC1 coding downstream 256844 4603018 ~ 4626532 (-)
CI01000006_04584782_04598738 DDX10, DDX10.L coding downstream 283965 4584782 ~ 4599411 (-)
CI01000006_04560607_04560993 NA coding downstream 321469 4559509 ~ 4562068 (-)
CI01000006_04987990_04988532 ANC13, ANAPC13.2.L, ANAPC13, ANAPC13.1 coding upstream 97262 4987819 ~ 4988879 (-)
CI01000006_05050241_05081653 NA coding upstream 159085 5049642 ~ 5081902 (-)
CI01000006_05096922_05124527 CADM1A, CADM1B, CADM1 coding upstream 206365 5096922 ~ 5124527 (-)
CI01000006_05264663_05267612 NA coding upstream 373562 5264119 ~ 5267873 (-)
CI01000006_05319715_05320035 NA coding upstream 428512 5319069 ~ 5320275 (-)
G43706 NA non-coding downstream 50592 4817188 ~ 4832784 (-)
G43665 NA non-coding downstream 202548 4680614 ~ 4680828 (-)
G43664 NA non-coding downstream 320695 4562442 ~ 4562681 (-)
G43660 NA non-coding downstream 345559 4537584 ~ 4537817 (-)
G43610 NA non-coding downstream 378711 4501404 ~ 4504665 (-)
G43738 NA non-coding upstream 71677 4962234 ~ 4962754 (-)
G43769 NA non-coding upstream 99911 4990468 ~ 4992838 (-)
G43773 NA non-coding upstream 132654 5023211 ~ 5025898 (-)
G43549 NA other downstream 527948 4352510 ~ 4355428 (-)
G43102 NA other downstream 1949392 2908451 ~ 2933984 (-)
CI01000006_02624725_02626124 COX8A other downstream 2257190 2624436 ~ 2626776 (-)
G42934 NA other downstream 2301170 2523776 ~ 2582206 (-)
CI01000006_06974359_06976736 NA other upstream 2082667 6973224 ~ 6976872 (-)
CI01000006_07500281_07507754 NA other upstream 2612588 7500246 ~ 7507976 (-)
CI01000006_10453630_10483241 NA other upstream 5592299 10453613 ~ 10484006 (-)
G47658 NA other upstream 6140354 11030911 ~ 11033127 (-)
CI01000006_11651067_11653761 SMD3, SNRPD3, SNRPD3L, MGC52856 other upstream 6759806 11650363 ~ 11654424 (-)

Expression


Co-expression Network