CI01000006_08512030_08512578


Basic Information

Item Value
gene id CI01000006_08512030_08512578
gene name NA
gene type coding
species grasscarp (Ctenopharyngodon idella)
category of species economic fish

Chromosome Information

Item Value
chromosome id CI01000006
NCBI id null
chromosome length 13024002
location 8511314 ~ 8512578 (-)
genome version v1_2015/06_NatureGenetics_grasscarp_Genome

Sequence

>CI01000006_08512030_08512578.mRNA
ATCAACTCTGGCTCCTGCATCACGGGGCAAACACTGAACGAGATTGAGTCACGGCACAAGGACATACTCTGTCTGGAGGCCAGCATTCGAGAGCTGCAACACATGTTTATGGATATAGCTGTGTTAGTCAACAGTCAGGGTGAAATGGCAAACAACATAGCAAAGACTGTGTTGAAAGCTGAAAATTATGTAGATCGAGGGAAAAAGAACGTCGAACAAGCTTGTGATTACAAGACATCCTGGCATATCCTGCCTTCATTCATGCGCAGAGCGAAACCAAAGACCAATGAGGGCTCTTGAACCAATCTTGAACTTTAAACATATGCTACTTGAAGGTGCTTTTGTGTTCTATGAAAATAAGGGATTCCTGTACCTTGCCTATACTAGAAAAATTCTTACTTGTCGCAGATTGTTGCATGCCCTGAATGTTTTGCTGATCAGATCCTTTTGATTTGTCTGTTGGATTTTCTCAGCCCATTTACAAGCAAACGGTTCTCAGTTGTTTCTGCTTACATGGTTAATGATTAAGCTTGCTCTCAGATAGCACTAGCGGGTATTTTCTGATGCAATATGACCGAGTCTCAATAGGTATGTTTACATGCACTAATTTTGATTTCGAGTTTTTTTTTTTTTTTTTAAATGGTCAGTACCTGTTGATTAATTTATTTCAGGTCTACACCATCCTCTTTCAATCTAATTGAAATTTTATTTGGATCGAGCTCAATCGAATTGATTGAGGTCTTTACTTAAAGGTTTTTCAGTCCGATTGAGCCATCAATCTGGCCATAAACAAATTATTTAGGAGCATGTAAATGTAGCTAATGTAAAAGCCCAGTTAGAGTCTCGTACATTTAACTTTTGTTTCTTGTGTTTACTTTTATTAGTATGTGTATTAGTTGTTGAGTATTGCTTTGGTGTAACTCAGTTCACCCAAAAATGAAAATTCTGTCCTCATTTACTCACCCTAATATCATTCCAAACCTGTATGACGTACTTTCTTCTGTGGAACAAATAAA

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
CI01000006_08512030_08512578.mRNA True 1016 mRNA 0.38 2 8511314 8512578

Neighbor

gene id symbol gene type direction distance location
CI01000006_08474273_08474602 RIMBP3B coding downstream 36712 8473987 ~ 8474602 (-)
CI01000006_08458656_08461261 NA coding downstream 49862 8458552 ~ 8461452 (-)
CI01000006_08437493_08455451 NA coding downstream 55573 8436893 ~ 8455741 (-)
CI01000006_08229755_08241410 SMPD4 coding downstream 269904 8228996 ~ 8241410 (-)
CI01000006_08225810_08227168 NA coding downstream 284146 8225691 ~ 8227168 (-)
CI01000006_08557710_08600107 VAV2 coding upstream 44273 8556851 ~ 8600107 (-)
CI01000006_08675642_08697114 NA coding upstream 162877 8675455 ~ 8697869 (-)
CI01000006_08736720_08740065 NA coding upstream 224082 8736660 ~ 8740065 (-)
CI01000006_08749304_08751622 BRD3A coding upstream 236159 8748737 ~ 8753683 (-)
CI01000006_08780644_08787820 NA coding upstream 267539 8780117 ~ 8787820 (-)
G46089 NA non-coding downstream 12512 8481249 ~ 8498802 (-)
G46018 NA non-coding downstream 234985 8198232 ~ 8276329 (-)
G45986 NA non-coding downstream 431058 8080018 ~ 8080256 (-)
G45985 NA non-coding downstream 431618 8079468 ~ 8079696 (-)
G45970 NA non-coding downstream 471365 8039680 ~ 8039949 (-)
G46199 NA non-coding upstream 464093 8976671 ~ 8976871 (-)
G46102 NA non-coding upstream 486515 8999093 ~ 9008209 (-)
G46076 NA non-coding upstream 501553 9014131 ~ 9016971 (-)
G46208 NA non-coding upstream 511561 9024139 ~ 9026251 (-)
G46257 NA non-coding upstream 583881 9096459 ~ 9096705 (-)
CI01000006_07500281_07507754 NA other downstream 1000358 7500246 ~ 7507976 (-)
CI01000006_06974359_06976736 NA other downstream 1534442 6973224 ~ 6976872 (-)
CI01000006_04560607_04560993 NA other downstream 3949246 4559509 ~ 4562068 (-)
G43549 NA other downstream 4155886 4352510 ~ 4355428 (-)
G43102 NA other downstream 5577330 2908451 ~ 2933984 (-)
CI01000006_10453630_10483241 NA other upstream 1970278 10453613 ~ 10484006 (-)
G47658 NA other upstream 2518333 11030911 ~ 11033127 (-)
CI01000006_11651067_11653761 SMD3, SNRPD3, SNRPD3L, MGC52856 other upstream 3137785 11650363 ~ 11654424 (-)
CI01000006_12348300_12348961 GLRX other upstream 3821831 12347180 ~ 12349383 (-)
CI01000006_12569291_12581457 CELL, CEL.2, CEL.1 other upstream 3838181 12569205 ~ 12582487 (-)

Expression


Co-expression Network

Homologous

species gene id symbol gene type chromosome NCBI id location