CI01000006_09857830_09868080


Basic Information

Item Value
gene id CI01000006_09857830_09868080
gene name NA
gene type coding
species grasscarp (Ctenopharyngodon idella)
category of species economic fish

Chromosome Information

Item Value
chromosome id CI01000006
NCBI id null
chromosome length 13024002
location 9857816 ~ 9868237 (-)
genome version v1_2015/06_NatureGenetics_grasscarp_Genome

Sequence

>CI01000006_09857830_09868080.mRNA
ATAACCATTTATTTAATGTAGACTAAACAGGCTCTGTGGAGAAATCAGGCTCCACAGATCAGAAGAACTGTTGCTAGAGCACAGTGGGTGCTATAACTGAGGCATCAAACATATACTGGAGTTTTTCAAACAACCTAGACCCTTGAAAACCATCAATATGAACCTGACCGCCCATCTTCTGGACCTCATGCTGAAGGCTTCCAACCTCTCTCGCTGGCAGTTCATCCAGGAATACTCCATTCCTCCATTGGTGGCAGTGCCCAGACTCCCTAGTGCCCTGCTTCCGGTTTTTGGCCTGCTCTACATGCTCATCTTTGGGTTTGCGTTGGTGGGCAATGGGGCAGTGCTGGTTCTCTTATGTCGCAGGAAGGCTCTGCAATCTCCCAGCACCTTTTTCATTTGCTCTCTGGCACTCAGTGACCTTCTGATCTCCATAGTGTGTGTTCCTGCCACACTGCTCCAGCACTTCTTCACCAATTGGTTGGCAGGAGATTTTCTGTGCAAGTTAATACCCTTCCTGCAAGTGACAGCTATCGCGACCAGCATGCTCACCATGACGTGTATTGCTGTAGAGCGTTTCCAGGGAATCCTTTATCCTCTGCACGTCCGCAACAGCTACTTTCTCTGTCATGCATTCAAGATGCTGGTGATCGTGTGGTCGGTTGCCCTGGCAATCGCGGCTCCCATGTGGTTTGTCCAGAAAGTGGAGACGTTTTGCATGAATCACTCCAATCAAATGATCATTGATGTCATGCTGTTTAAGGCAGCAGATAAACTTCATGAGAAGGATAAAAAGCTCTCTTTACCCATTAGAAATGCTTGTCATTGTTTGGAAGTGTGGCCAAGCCTGCAGCAAAGGAGAGCCTACACTACCTGCCTGTCCGTACTGGTGTTCCTGGCCCCCTTGGCGACCATGGCCATCCTGTACTGGAAGATCATGCGAGAGCTCTGGGGCAAACACAAAGTACATGATGTCATGTTTCAAACACTCCCGGGATCTGAAATCAAAAAGATTACCAGTAGCACTATGGCCAAAACCATGAGGCTGAATGCAGCCAAGAAACTAACACACAGACTGAAAGCCTGTAATAAACACTGAAAGTCAGGAATAAA

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
CI01000006_09857830_09868080.mRNA True 1113 mRNA 0.48 6 9857816 9868237

Neighbor

gene id symbol gene type direction distance location
CI01000006_09383325_09387907 AQP3B, AQP3 coding downstream 469909 9383270 ~ 9387907 (-)
CI01000006_09338560_09342684 VPS29 coding downstream 514033 9338265 ~ 9343783 (-)
CI01000006_09330816_09334587 ATPBB, GPN3 coding downstream 523051 9330616 ~ 9334765 (-)
CI01000006_09326410_09330229 ARPC3, ARPC3.L coding downstream 527554 9326230 ~ 9330262 (-)
CI01000006_09282220_09315540 ATP2A2.S, ATP2A2, ATP2A2A, ATP2A2B coding downstream 541320 9280855 ~ 9316496 (-)
CI01000006_09870216_09870854 NA coding upstream 1560 9869797 ~ 9870854 (-)
CI01000006_10016544_10031947 FAM169AB coding upstream 148142 10016375 ~ 10031947 (-)
CI01000006_10044550_10045827 NA coding upstream 175813 10044050 ~ 10047230 (-)
CI01000006_10053771_10055045 NA coding upstream 185286 10053523 ~ 10055823 (-)
CI01000006_10078319_10079570 NA coding upstream 209526 10077763 ~ 10079570 (-)
G46891 NA non-coding downstream 3584 9854032 ~ 9854232 (-)
G46764 NA non-coding downstream 122274 9730459 ~ 9735542 (-)
G46763 NA non-coding downstream 291974 9565615 ~ 9565842 (-)
G46465 NA non-coding downstream 428239 9429291 ~ 9429577 (-)
G46455 NA non-coding downstream 441525 9416020 ~ 9416291 (-)
G46902 NA non-coding upstream 50342 9918579 ~ 9921173 (-)
G46972 NA non-coding upstream 120164 9988401 ~ 9988611 (-)
G46973 NA non-coding upstream 120967 9989204 ~ 9989436 (-)
G46979 NA non-coding upstream 127302 9995539 ~ 9995742 (-)
CI01000006_07500281_07507754 NA other downstream 2346860 7500246 ~ 7507976 (-)
CI01000006_06974359_06976736 NA other downstream 2880944 6973224 ~ 6976872 (-)
CI01000006_04560607_04560993 NA other downstream 5295748 4559509 ~ 4562068 (-)
G43549 NA other downstream 5502388 4352510 ~ 4355428 (-)
G43102 NA other downstream 6923832 2908451 ~ 2933984 (-)
CI01000006_10453630_10483241 NA other upstream 614619 10453613 ~ 10484006 (-)
G47658 NA other upstream 1162674 11030911 ~ 11033127 (-)
CI01000006_11651067_11653761 SMD3, SNRPD3, SNRPD3L, MGC52856 other upstream 1782126 11650363 ~ 11654424 (-)
CI01000006_12348300_12348961 GLRX other upstream 2466172 12347180 ~ 12349383 (-)
CI01000006_12569291_12581457 CELL, CEL.2, CEL.1 other upstream 2482522 12569205 ~ 12582487 (-)

Expression


Co-expression Network

Homologous

species gene id symbol gene type chromosome NCBI id location