CI01000006_12670692_12674459


Basic Information

Item Value
gene id CI01000006_12670692_12674459
gene name NA
gene type coding
species grasscarp (Ctenopharyngodon idella)
category of species economic fish

Chromosome Information

Item Value
chromosome id CI01000006
NCBI id null
chromosome length 13024002
location 12670692 ~ 12674459 (-)
genome version v1_2015/06_NatureGenetics_grasscarp_Genome

Sequence

>CI01000006_12670692_12674459.mRNA
TCAGGAGCCCCTATAGACAACTGCATCGCAGTCAGACGGACAGTATCTTCAGGTTTAATGAATCACCTTCTTCTACACCTGCATCCCCGTACAGATCATCAGTGGTATCTCCTTACATTCAGTCGACTACCACTTCGCAGAGCCCACCTCTTTTCACTAACACTGCAGCTTCCTCATTGCAGAATGGTGCAACGTTATCTATCAAAAGCCAGATCCACCCAACTTCACCTAAGATAATGGAGTCATGTGCCGTAACTGCCGCTGACCCTGCGCCACGGCTCCAAACTCAATCATCACCTTCAACTATTGCAACTGAATCTGAAACAGAAAGTCCTATTGGTGAAATACTAGATAGTCTGGTCTTTTATCCACCTCCACCAACTGCTGAGCAGCTCAAAACAGATCAATCAGAGATGGTGGATGAGTTTCCTCCACCTCCATCTGGTTTTGAGAATTCACCGGAATTGGCTGTGAACCAGCCTGAGACACTTGTCGACCCCTTAGACACCCTTATGTCATCTCTTCCTCCATCATGTCTTGTGGTACCTGAGCCCCCCTTCAGACCGCTTCCTGCACTGCCTGTTGCCCCACGAATGCTGAAAGACCTGGAATTGAAAGGAGATTTTACTGCTCGGGCATCGGTTATATCTACGAGTGGAAAAGAACAAGATGAGAAAATGTTGGAAGAAAGTGAGAGTGGAAAAGAACAAGATGGGAAAATGTTGGAAGAACATGGGAGTGGAAAAGAACAAGATGGGAAAATGTTGGAAGAATGTGACAGCGGAAAAGAAAAAGATAGGAAATTGTTGGAAGAACATGAGAGTGGAAAAGAAAAAGATGGGAAAATGTTGGAATGTGAGAGTGGAAAAGAACAAGATGAGAAAATGTTAGAAGAAAGTCAGAGTAGAAAAGAACAAGAGGGAAAAATGTTGGAAGAACCTGACAGTGGAAAAGAAAAATATGGTAAAATGTTGGAATGTCAGAGTGGAAAAGAACAAGATGAGAAAATGTTGGACGAAAGTGAGAGTGAAAAAGAACAAGATGGGAAAATATTGGAAGAACATGAGAGTGGAAAAGAACAAGATGGTAAAATGTTGGAAGAACGTGAGAGTGGAAAAAAACAAAAGGGGAAAATGTTGGAAGAACGTGAGAGTGGAAACGAACAAGATGGGAAAAGGTTGGAAGAATGTAATTGTGGAAAAGAACTAGATGAGAAAATGCTGGAAGAACGTGAGAGTGGAAAAGAAGATAATGGGAAAATGTTGGAAGAATGTGACAGTGGAAAAGAAAAAGATGGGAAAATGTTGGAAGAACATGAGAGTGGAAAACAACAAGATGGTAAAATGTTGGAAAGTGAGAGTGGAAAAGAAGATGATGGGAAAATGTTGGAAGAATGTGACAGTGGAAAAGAAAAAGATGGGAAAATGTTGGAAGAACATGAGATTGGAAAAGAACAAGATGAGAAAATGTTGGAATGTGAGAGTGGAAAAGAACAAGATGAGAAAATGTTGGAAGAATGTCAGACTGGAAAAGAACAAGATGGGAAAATGTTGGAAGAACATGAGTGTGGAAAAGGACAAAGTGAGAAAATGCTGGAAGAACGTGACAGTGGAAAAGAACAAGAAGGGAAAATGTTAGAAGAATGTGAGTGTGGAAAAGAACAAGATGGGAAAATTAGTGAGGAAGAAGAGAATGAAAAAATACAACATACAAAAATTATGTTAGAATATTATGCATTAGAAAATGAGCACGATAGGGAAATTACAGAAAAACATGAGGAAGATGGGAAAAGTTTGAAAGAATGCGAGAATGAAAAAATGATGGAAGGACATGAGCAAGATGGAAAAATTGTGGATGTATTTGACAATGATAATGAACAAGATAGGGAAAAAATTGAAGTATTTGAGACTGAAAAAATGATGGAAGAATGTGGGCAAGAAAATGAGCAAGATAGTAAAAGTACAGAAATATGTGAGGAAGAACATGAGAGTGAACAGAAACAAGGTGGGGAAAATAGAAAAATAATGGAAGAACATGGAAGCAAAGAAAAACAAGATAGGAAAATTGTTGATGCATTTGACAGTGACAAAGAACAATATGGGACAAGCATGGAAGTATCTGAGACTGAAAAAATACATTATGTGAAAAGTATGGAAAAATGTGGGCAAGAAAATGCGCAAGATGGAAAAATTGTAGAAAAAAGTGAAAAAGAACATGACAATGAAAAAGAACAAGATGGGAAAATTGTAGTAAAACATGAAGATGGGAAAAGTCCGGAAGAACACAATAGTGAAAAAATGCAGGATTGGAAAATGATAGAGGACTGTGAGAGTGAAAAAATACAAGATGGAGACATCATAGATGAACAAGAAAGTGGCAAAGAAGAAGATGGGGGAATTCTGGAAAATGAGCAAAATGGAAAAATTGTAGAAAAATGTGAGGAAGAACATGAGAGTGAAAAAGAGCAAGATATGAAAATTATACAAACAAATGACTGTGAAGAACAAGATGGTAGAAGGTCAGAAGAACGGGACTGGAAAATTATGGAAGAGCTTGAGAGTGAAAAAATACAAAATGCAAAAATGAAGTTAGAATATATGGGAGAAAAAGAGCAAGATTGTAAAATTGGGGAAAGGCATGAAGATGAAAAAAGTCTGGAAGAACACAAGAGTGAAAAAGAACAGGATTGGAAAATGACAGAAGACTATGAGAGTGAAAAAATTCAATATGGGAACATCATGGAAGAACATGAAAGTGAAAAAGGACAAGATGGGATGACGGAAAACCGACAGATCCAAGACAATGAAGGAATGTCATGTGTGGATGTAGACAGAACAGTGAATGTGACTGTGCTCAGGAAGGACGAATCATATCCAGAGATTATAAAGAGGGATGAGGCTACAGAAGAAGGCGTTGAACAGGTGAAGAGTGATAAAGTAAATGAGAAGGAAGAGATGAACACACCTTTAATCCAGACCGAAGAATCCAGTGCTGATACACTTTTCTCCCAGCATTCACCACTCGTCCCAGAATCCCATGCCACAGAGCCATCTCAATACAATGACATATCTACTCCTGAAAGTATTTCAACCACTCAAGATAAAAATGAGCCACAGACAAGCTCCTCACACCAAATAAACTTACCAACTATTCAGGTTGAGTCAGATCTTTCCAACCTGAGCAATCAAAGAGATTCAGAAGACATGAAAGAGAAGACATCGGAATCTGTTGACTCTCACTCTTCCTCCAAAAACAGCCCAGACGCTGAACAGGGTCTTAATAAAGAAACACATGTTACAGTGAAGGATGAACAGACTGATGCAGAAATGCTTAAAGAGGTTAACATTTTGGACGGCAGCAATGATTTGGTTGAAGGGATCAATGCTGAGTGCAAGACATCACCTATATCTGAGAATCAAGCCAGGATTGGACAGCCAGATGAGAAGGAGGGGCTTGTACCTGTCAGTAATTTCCTCCAAGACCCAG

Function

NR:

description
hypothetical protein cypCar_00001779

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
CI01000006_12670692_12674459.mRNA True 3486 mRNA 0.39 2 12670692 12674459

Neighbor

gene id symbol gene type direction distance location
CI01000006_12647432_12651091 NA coding downstream 19601 12647003 ~ 12651091 (-)
CI01000006_12583905_12591335 GTF3C5 coding downstream 79357 12583784 ~ 12591335 (-)
CI01000006_12569291_12581457 CELL, CEL.2, CEL.1 coding downstream 88205 12569205 ~ 12582487 (-)
CI01000006_12550833_12565605 NA coding downstream 104307 12550653 ~ 12566385 (-)
CI01000006_12520122_12540383 GRIN1, GRIN1A coding downstream 130309 12519971 ~ 12540383 (-)
CI01000006_12677322_12678268 NA coding upstream 2703 12677162 ~ 12678268 (-)
CI01000006_12697606_12714750 AGXT2 coding upstream 23147 12697606 ~ 12714750 (-)
CI01000006_12718517_12732483 PRLR, PRLRA coding upstream 43927 12718386 ~ 12733092 (-)
CI01000006_12853718_12865868 NA coding upstream 179222 12853681 ~ 12865868 (-)
CI01000006_12876023_12888072 NA coding upstream 201369 12875828 ~ 12888072 (-)
G48571 NA non-coding downstream 16802 12653629 ~ 12653890 (-)
G48459 NA non-coding downstream 207181 12462404 ~ 12463511 (-)
G48422 NA non-coding downstream 492498 12171561 ~ 12178194 (-)
G48490 NA non-coding downstream 510609 12159558 ~ 12160083 (-)
G48413 NA non-coding downstream 588065 12082243 ~ 12082627 (-)
G48576 NA non-coding upstream 25013 12699472 ~ 12699782 (-)
G48577 NA non-coding upstream 25610 12700069 ~ 12700268 (-)
G48578 NA non-coding upstream 27131 12701590 ~ 12701857 (-)
G48579 NA non-coding upstream 34811 12709270 ~ 12709479 (-)
G48580 NA non-coding upstream 38696 12713155 ~ 12713603 (-)
CI01000006_12348300_12348961 GLRX other downstream 321621 12347180 ~ 12349383 (-)
CI01000006_11651067_11653761 SMD3, SNRPD3, SNRPD3L, MGC52856 other downstream 1016285 11650363 ~ 11654424 (-)
G47658 NA other downstream 1637565 11030911 ~ 11033127 (-)
CI01000006_10453630_10483241 NA other downstream 2182257 10453613 ~ 10484006 (-)

Expression


Co-expression Network