G140391


Basic Information

Item Value
gene id G140391
gene name NA
gene type non-coding
species mexican tetra (Astyanax mexicanus)
category of species ornamental fish

Chromosome Information

Item Value
chromosome id NC_035912.1
NCBI id CM008315.1
chromosome length 41032606
location 10360991 ~ 10361377 (+)
genome version Astyanax_mexicanus-2.0_2017_mexican_tetra_Genome

Sequence

>TU190071
ttttttttatcgGGACTGAACATcaacatataatttaaacagaccGAACCATTCCTTTCTCTGTAAGCCTAAAATCtgcacacagcaaaaaaaaacaagctactcCCAAGCAACAAGCAACATTTCGATAACAGAGACCTCAGAGACCATGACTAATTTTTcagacatttagaaaaaaaggatAGATAAGTACAAACTAGCGAGATATTGTGATAGcgttaagctagctaaccttagtgatgaggtagctaaaatactaatgttactggggagagtactaaagctagtgacgagc

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU190071 True 295 lncRNA 0.37 2 10360991 10361377

Neighbor

gene id symbol gene type direction distance location
gpr160 NA coding upstream 84771 10272014 ~ 10276220 (+)
sec62 sec62,LOC107738178,LOC102781860 coding upstream 114989 10235722 ~ 10246002 (+)
samd7 samd7 coding upstream 126731 10219573 ~ 10234260 (+)
LOC111194303 NA coding upstream 148661 10190811 ~ 10212330 (+)
LOC103040576 slc4a2,LOC108413474,LOC105025010 coding downstream 124345 10485722 ~ 10524437 (+)
LOC103039831 ubtfl,LOC108267581 coding downstream 169614 10530991 ~ 10552601 (+)
LOC103042199 LOC108437251,LOC108267580 coding downstream 197080 10558457 ~ 10680089 (+)
LOC103039003 fam49b,LOC108437217,LOC108267758,LOC107713994,LOC106592588,LOC107657432,LOC107718035,LOC107556887,LOC107701021 coding downstream 322211 10683588 ~ 10750675 (+)
LOC103038209 amph coding downstream 844173 11205550 ~ 11308230 (+)
G140341 prkci,LOC107659412,LOC107558824 non-coding upstream 25922 10332828 ~ 10335069 (+)
G140331 NA non-coding upstream 53276 10307420 ~ 10307715 (+)
G140305 NA non-coding upstream 82480 10276877 ~ 10278511 (+)
G140297 NA non-coding upstream 159152 10198052 ~ 10201839 (+)
G140274 NA non-coding upstream 204943 10098168 ~ 10156048 (+)
G140392 NA non-coding downstream 10075 10371452 ~ 10374169 (+)
G140394 NA non-coding downstream 14870 10376247 ~ 10445727 (+)
G140401 NA non-coding downstream 30014 10391391 ~ 10394260 (+)
G140404 dapk3,LOC103038916,LOC106600507 non-coding downstream 52167 10413544 ~ 10416765 (+)
G140405 dapk3,LOC103038916,LOC107706382,LOC107738169 non-coding downstream 55822 10417199 ~ 10419032 (+)
G140336 prkci,LOC107659412,LOC107706387,LOC102783124 other upstream 15520 10311100 ~ 10345471 (+)
G140262 NA other upstream 366925 9993586 ~ 9994066 (+)
G140258 NA other upstream 370695 9989918 ~ 9990296 (+)
G140103 NA other upstream 615636 9743698 ~ 9745355 (+)
G140062 NA other upstream 820181 9539775 ~ 9540810 (+)
G140402 NA other downstream 34143 10395520 ~ 10399976 (+)
sppl2b sppl2b,sppl2,LOC107738168,LOC107591351,LOC107668984 other downstream 65889 10427266 ~ 10444540 (+)
G140520 NA other downstream 437168 10798545 ~ 10798891 (+)
G140659 NA other downstream 1018721 11380098 ~ 11383505 (+)
LOC111194237 NA other downstream 1094108 11455485 ~ 11478740 (+)

Expression


Co-expression Network