LOC103036120


Basic Information

Item Value
gene id LOC103036120
gene name NA
gene type misc
species mexican tetra (Astyanax mexicanus)
category of species ornamental fish

Chromosome Information

Item Value
chromosome id NC_035912.1
NCBI id CM008315.1
chromosome length 41032606
location 40997078 ~ 41000503 (+)
genome version Astyanax_mexicanus-2.0_2017_mexican_tetra_Genome

Sequence

>TU200515
TCTCACCAGGATCTCCTGAAGagcttttacatttatttattgaagctGTAAGGAATAGAAACTTTTAGAAAACATGAATCAGACAATTCTAGTGATCACTGTTTTAGCTTGTGTGGCTTTCTCCATAACAGAGGGTGCAGCTATATATATTCAGCCTAGGTGCAGATGTACAGAcactcaaaaaacacaaatcaagACTGAGAAGATTCAAAACTTTGTGAGCATTGCTCCTGGACCTCACTGCAAGCGCCTCCAAGTCATTGCCACTGTGAAACATAGGCACATGGAGGTAGAGGTCTGTGTCAACCCCAGTCACAAGTGGGTCAAAGAAGCCATGGCTAAACTGGAACAGAAGAAATCTAAGTCTACAACAGTTCCACCACAGCTCCACCACAGCTCCACCACAGCTCCACCACAGTTCCACCACAGCTCCACCATAGCTCCACCACAGTTCCACCACAGCTCCACCACAGCTCCACCACAGCTCCACCACAGCTCCACCACAGTGACAAACTGATTCAAGATTCAAACAACAAGAAACAGTGAAATGCTTAAAATGACCAAagaagtttgtttgtttgtttgttaatttaaataaatgttattaactATTTAATTGTGTGAAGACTGCAGTGGCCAGTATGTGAAATTAACATGaagttgtattgtattgtactgtagtagtgtattttcttcttttttaagcaCTTTAAATAAT
>XM_022677690.1
TCCAACCTGACAAAtacccaaaaaaaaacctttgtcaTTCCAATTTTAAGGTTATGCATGCTCAGTACATAAAAACAGGAACAACTATGTGTAAGTTAACGTTGTGATGTCAGCATTTTCAAAAGGTCACAGTTTGTGCatccacacaaaaacacagtggacACTAATCCACATGGAAAAAATTGCACTTGCAGTGTGCAGTGACctaaagttgaactttttaagGTGAATTGGAGGCCAAATTTGTGAAGGTGAgaagatgcataaaaataaatgcttccTGCTGATTTATAGTACTACAGAAAcataatgtacagtaaatactgtaataacCTGTTAGTGTCAGCCTTATTGAGAATTGCCTGGCATCACCAACATCCTGGAAATTAACAGGATGTATGTACTTCCTCTGAAGCATGTGAGCCATGCACAGAGACAGCCAATCATGCATTTTTGCAAcatttttccccccaaaaaatgttTGAAGATGATTTTTCCTTGACATGTTTCTGTGCTCCTCGGTGTAAAAtttcaaatcaaaccaaaccaatcagAAGTAAATAATATAGTACAGTAAAACTCAGATTTAAGGGCATTTGCACAAATGTTGGTTTttggttttaatgtaaaaattataATACTCTGGTTTACAGTCTAGTCCATGTTATGGCAccataatatttgtatttacatGTGACTATGGTTACCCAGGcttgtttcattggtttattaGTACAGTCATAAAATATAGGCTTCCCTCTAAGCATTCAAAGACCTTTGGACTCTGTATATGTTTTTACCTCAGTACCAATGGAAGCCAAagctaaaattaatatattaacataACGCAAAAATAATTAGCCCTTGGTATCATCTGTCtggaaaattattaaaaaataacacagtGTTGAGCTTAATAATCACGAAGGGACTGGTAGGCCAAGGAAAACGATAACTGCTGATAGGCAAGAGAATCCCCACTGATCTTCAGAAAATGTTCAGTTGTCTGTGCAACAAATCAACAGCCTTCTGGAGTCTGGTGTGCATTTGTCAGAAACTAATATTCAAAGAAAACCTCATGAACAATGTACAGAATGGCTACattgcagttaaaaaaaatacttgctgGAATTCTGAAAAAAAGGTCTTGTAGATAGATGAGACCATTAGATAACCTGTATCAGAGTGATAATGGAAAGGGCAAACTGTGAAGACAAAATAGATCTGCCTACAGTCTAAAGCATATCACCTCACATCTGTGACACATGACAGGGGGTGTTATGACTTGGGCATGTACGATTTCCCTTTTTCACTTTTGCATTTTCCTTCATTGATGGTGTAACTGATGAAGGCAGTAGCACAATGCATTGTGGGAGCACTTCATCCTACAGATAATGATCTTAAACCTATTGCAACATAAGGCAAAACAGGTGTTTCTTAATGTAAAAACGGAAACTCTTACGTGTTACCTAGCAGACAAGCAGGAGCTGAAGATGACTGCATAAGAGACTTGAGAAAGCATCACTTGAGATGATATCCAGCATCAAGTGATGTCTACAGATGGCAGACTTCAAGCAATCATTTAATATAAGTAATAAATACCCAACACTGCTATGTCCCAAACATCATGTTGCCCTAAATGGGGGATGTGAAAAAGGAATGTACTTCAACatagaaaaaattaaataaaggcaAATACACTTGATTCTATAAAAATTAAGTCAAGTATCTTTTTAAAGTATGGAGCAAAAGgtcatttaaagaaaaaaagcacacttttaaaagaagacaacaaagaagaagaaaaaaagacgaTGAAGAGGACAAAGAATTCAATGTCATAACTGATACTGATATATGTGTTTAACaaagaaactcttatttttactcttttctggATTAAGTGTGTTAAGTCTAGCATTATTCCTGCTCACTATCCCTTGTGCATCACAGTTCAGAGGAAACAAATGCAGCTCTTCTCTGGAACTTCACAGCAGCGTAACCTCTTTTGCAATCTTACTCTGTGGAGGCGGGAGTTCTTTTAAAAGGGACAGCAGCACAGTGAGCTGAGCAGCAGACTGGGGAATCTCACCAGGATCTCCTGAAGagcttttacatttatttattgaagctGTAAGGAATAGAAACTTTTAGAAAACATGAATCAGACAATTCTAGTGATCACTGTTTTAGCTTGTGTGGCTTTCTCCATAACAGAGGGTGCAGCTATATATATTCAGCCTAGGTGCAGATGTACAGAcactcaaaaaacacaaatcaagACTGAGAAGATTCAAAACTTTGTGAGCATTGCTCCTGGACCTCACTGCAAGCGCCTCCAAGTCATTGCCACTGTGAAACATAGGCACATGGAGGTAGAGGTCTGTGTCAACCCCAGTCACAAGTGGGTCAAAGAAGCCATGGCTAAACTGGAACAGAAGAAATCTAAGTCTACAACAGTTCCACCACAGCTCCACCACAGCTCCACCACAGCTCCACCACAGTTCCACCACAGCTCCACCATAGCTCCACCACAGTTCCACCACAGCTCCACCACAGCTCCACCACAGCTCCACCACAGCTCCACCACAGTGACAAACTGATTCAAGATTCAAACAACAAGAAACAGTGAAATGCTTAAAATGACCAAagaagtttgtttgtttgtttgttaatttaaataaatgttattaactATTTAATTGTGTGAAGACTGCAGTGGCCAGTATGTGAAATTAACATGaagttgtattgtattgtactgtagtagtgtattttcttcttttttaagcaCTTTAAATAATTCCACGTACTTTGTCTTGTTATTTCTATTGTTCTATTATGTTGTATTTGGTTACA

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU200515 False 718 TUCP 0.41 4 40999164 41000448
XM_022677690.1 True 2859 mRNA 0.37 4 40997078 41000503

Neighbor

gene id symbol gene type direction distance location
LOC103042538 NA coding upstream 16291 40969841 ~ 40980787 (+)
LOC103042229 NA coding upstream 28732 40956004 ~ 40968346 (+)
LOC103035600 NA coding upstream 63957 40930528 ~ 40933121 (+)
LOC103042443 NA coding upstream 73666 40914639 ~ 40923412 (+)
LOC111194221 NA coding upstream 104547 40888111 ~ 40892531 (+)
LOC103036419 NA coding downstream 4191 41004694 ~ 41007443 (+)
G148105 NA non-coding upstream 58876 40934289 ~ 40938202 (+)
G148103 NA non-coding upstream 86809 40908904 ~ 40910269 (+)
LOC111194222 NA non-coding upstream 88925 40906575 ~ 40908153 (+)
G148086 LOC108411458 non-coding upstream 163929 40832387 ~ 40833149 (+)
G148084 NA non-coding upstream 170504 40824120 ~ 40826574 (+)
LOC111194224 NA non-coding downstream 22925 41023428 ~ 41025021 (+)
LOC107197094 NA other upstream 94473 40894544 ~ 40902605 (+)
LOC103041218 LOC108411459,LOC108267979 other upstream 126565 40836324 ~ 40870513 (+)
G148036 NA other upstream 209940 40761398 ~ 40787138 (+)
c16h20orf27 cunh20orf27,c7h20orf27,si:ch211-74f19.2,LOC107755635,LOC107697474 other upstream 302300 40667240 ~ 40694778 (+)
G147592 NA other upstream 1845878 39147599 ~ 39151200 (+)
LOC103036716 LOC103036716 other downstream 10376 41010879 ~ 41015927 (+)

Expression


Co-expression Network