G147592


Basic Information

Item Value
gene id G147592
gene name NA
gene type unknown
species mexican tetra (Astyanax mexicanus)
category of species ornamental fish

Chromosome Information

Item Value
chromosome id NC_035912.1
NCBI id CM008315.1
chromosome length 41032606
location 39147599 ~ 39151200 (+)
genome version Astyanax_mexicanus-2.0_2017_mexican_tetra_Genome

Sequence

>TU199712
GGTTATGAAATTTGCCGCTCAGCTCTTTTggtagctagttaacctagctagcgtTGCGCTCCTCACGGTATCAGCGTCGTCGTTTTAGACGGTGGACAAACGTCGTTTTCGCACACGGAACGAGCTCTAAAAAGGTCCTCTCTCAGTAATCCAGCCGCTCCGGTGTGTGACCGCGGACGCAGCGCTCCAGCCCCCCCAGCCCAGCCGCCTCCGAATCAGGGAGAATATATGAAGACATCGTACGAAGTGCCGCGGGAAACACTGCTCTCAGAAATGTACGGCACGGCGGGAATGCCCGAGCTCCTGCCCCCGGCGGAGTGCGAGCTCAGACCCAGCCCGCTGTACAGCGGCGTGGAGGCGCAGAGGAGCGGCGCTGAGATGCGGCCTCCTCcgcagagaacacagagagccCCCAAACTCGGCCAGATCGGCCGCTCCAAGAGAGTGGTCATTGACGATGAAGACTTGGATGACATCATGAACAACAACAGAAGCTTTCCTGTATCCATCAGTGTCTCACCTATTGCCTAAAGCATGACAGACTATGCCAAAGCTGTGACAAGGCCAATGCGGATCATTAAACGAGTTATGAAATCATTTCAATTCATCCAGAAAATTTGACAGGTTATgaatcacaaacacactcaaacatatCACTGTGGAtataccctctctctctttctctctctctcctctctctctctctctctctctctctctctctctcaattaaCACCTCTCACATTGCTACAGCTTCAAAAACGAGGACTCGCTGGCTTGTTGCTTGTTTGTAACGTAACGTTTGTAACGTATACCTGTTGTTTCTGTGGTTACCTCTCTGTTTGACACTGCATTTTGATACCGAGATAAGTGATCTTCAAAGTTACAGggctatatttataaaaaaaaatatgcacttTAGGAGGAAAATGACCAAACAGACCTGGTTTGGTAGGGTTGCTCCTCTCTTACAGAATATTTGTTCTGTGCAAGTCTGTTAACGTGTAACGTGGCATTAGCTTAAGACCTACGGTTACCTTGGGAACCAAAGTGTCTTGGCATGTCTCTTATGCACTCTGAACTTTAGCAGTGAAATTGTATTAGCACGGACTGTTTTTAAATCGTcaccatttatatatattgttcacCTTTGGTCTGAATGAAATTAGTACCTTTATCAGAACCTGGATATGATCtaaagtttagtttagcttagccttTAATGGGAGCAGATTGATTCTACTGCACTTGAATTAGAGGTGCATAAATTGGTGATTTACAATGGATTTGCATGGAAAttgttaattgatttatttttttgtatttgtaaattgcatttttgaaaataaagtATGCATGATTATCAAC

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU199712 True 1368 TUCP 0.45 3 39147599 39151200

Neighbor

gene id symbol gene type direction distance location
tifa NA coding upstream 121839 39022937 ~ 39025760 (+)
LOC103041464 LOC103041464,LOC108410411,LOC108268320,LOC107562848,LOC107691962,LOC107742295 coding upstream 237443 38865417 ~ 38910156 (+)
LOC103042891 NA coding upstream 286306 38848973 ~ 38861293 (+)
LOC103022744 LOC107104322 coding upstream 501421 38642535 ~ 38646178 (+)
LOC103044424 LOC108434855,LOC108267436,LOC107669001,LOC107742332,LOC107562838,LOC107588216,LOC107691958 coding upstream 814639 38324773 ~ 38332960 (+)
nlgn2 nlgn2,nlgn2a,LOC103033407,LOC107664280,LOC107564776,LOC107659731,LOC107750775,LOC107753966 coding downstream 377222 39528422 ~ 39776934 (+)
urgcp NA coding downstream 628332 39779532 ~ 39790417 (+)
LOC107197636 LOC107197636,LOC108434818 coding downstream 646824 39798024 ~ 39800954 (+)
LOC103027388 NA coding downstream 653698 39804898 ~ 39806811 (+)
LOC103027097 LOC108434835,LOC106608815 coding downstream 658344 39809544 ~ 39812279 (+)
G147582 NA non-coding upstream 14428 39081282 ~ 39133171 (+)
G147549 fxr2,LOC108434865,LOC108267464,LOC107753958,LOC107750766 non-coding upstream 100883 39041621 ~ 39046716 (+)
G147573 rbm4.3,LOC106577685,LOC101471146 non-coding upstream 129955 39014027 ~ 39017644 (+)
G147548 sf1,LOC107562691 non-coding upstream 149883 38963740 ~ 38997716 (+)
G147572 pygmb,LOC108434859,LOC107701539,LOC105903101,LOC107742296,LOC107562665 non-coding upstream 164398 38982826 ~ 38983201 (+)
G147602 NA non-coding downstream 47747 39198947 ~ 39201785 (+)
G147610 chrnb1 non-coding downstream 76991 39228191 ~ 39244389 (+)
G147668 NA non-coding downstream 108736 39259936 ~ 39260651 (+)
G147669 NA non-coding downstream 111608 39262808 ~ 39264163 (+)
G147702 NA non-coding downstream 260344 39411544 ~ 39412192 (+)
G147496 NA other upstream 532244 38614878 ~ 38615355 (+)
c16h4orf48 cunh4orf48 other upstream 2105372 37038935 ~ 37042227 (+)
acap1 acap1,LOC107595305,LOC107731905,LOC107683535,LOC107675497 other upstream 2428312 36690693 ~ 36719287 (+)
G146805 acadvl,LOC107731915,LOC107595296,LOC107675499 other upstream 2653142 36491512 ~ 36494457 (+)
cct7 cct7,LOC107697251,LOC107721663,LOC107583281,LOC107744273,LOC107691460,LOC107571935,LOC102781788 other upstream 3741269 35399778 ~ 35406330 (+)
c16h20orf27 cunh20orf27,c7h20orf27,si:ch211-74f19.2,LOC107755635,LOC107697474 other downstream 1516040 40667240 ~ 40694778 (+)
G148036 NA other downstream 1610198 40761398 ~ 40787138 (+)
LOC103041218 LOC108411459,LOC108267979 other downstream 1685124 40836324 ~ 40870513 (+)
LOC107197094 NA other downstream 1743344 40894544 ~ 40902605 (+)
LOC103036120 NA other downstream 1845878 40997078 ~ 41000503 (+)

Expression


Co-expression Network