cct7 (cct7,LOC107697251,LOC107721663,LOC107583281,LOC107744273,LOC107691460,LOC107571935,LOC102781788)


Basic Information

Item Value
gene id cct7
gene name cct7,LOC107697251,LOC107721663,LOC107583281,LOC107744273,LOC107691460,LOC107571935,LOC102781788
gene type misc
species mexican tetra (Astyanax mexicanus)
category of species ornamental fish

Chromosome Information

Item Value
chromosome id NC_035912.1
NCBI id CM008315.1
chromosome length 41032606
location 35399778 ~ 35406330 (+)
genome version Astyanax_mexicanus-2.0_2017_mexican_tetra_Genome

Sequence

>TU198225
GTTCCAGTGCATTGTGGGACCCGGCCGGTCTTCCTCTCGCCGCAAAGATGATGcccaCTCCAGTTATCCTGCTGAAGGAGGGGACAGACACCTCTCAGGGTGTCCCCCAGCTCATCAGCAACATCAATGCCTGTCAGGTCATCGCAGAGGCTGTGCGGACCACTCTGGGCCCTCGTGGCATGGATAAGCTCATTGTGGACAACAGAGGCAAAGCCACCATCTCTAATGATGGTGCTACCATCCTGAAGCTGCTGGATGTGGTCCACCCTGCAGCTAAAACCCTGGTGGACATCGCCAGGTCTCAGGATGCAGAGGC
>XM_007242039.3
CTCTGGTGTTGATAGAGAATTACAGGCGCTGCATGGTTCTAGAGAGTTCCAGTGCATTGTGGGACCCGGCCGGTCTTCCTCTCGCCGCAAAGATGATGcccaCTCCAGTTATCCTGCTGAAGGAGGGGACAGACACCTCTCAGGGTGTCCCCCAGCTCATCAGCAACATCAATGCCTGTCAGGTCATCGCAGAGGCTGTGCGGACCACTCTGGGCCCTCGTGGCATGGATAAGCTCATTGTGGACAACAGAGGCAAAGCCACCATCTCTAATGATGGTGCTACCATCCTGAAGCTGCTGGATGTGGTCCACCCTGCAGCTAAAACCCTGGTGGACATCGCCAGGTCTCAGGATGCAGAGGTTGGTGATGGAACCACCTCCGTGACTCTTCTTGCAGCTGAGTTTCTGAAGCAGTTGAAGCCGTACGTGGAAGAAGGCCTCCACCCTCAGACCATTATCCGAGCTTTCCGTATTGCCACTCAGCTTGCAGTCAAAAAGATCAAGGAGATTGCAGTCACCGTCAAAAAGGACAACAAAGAgGAGCAGAGGCAGTTGTTGGAGAAATGTGCCGCCACAGCACTTAACTCAAAGCTGATTGCTGGACAGAAGGAATTTTTCTCCAAGATGGTGGTAGATGCAGTGATGATGCTGGATGAACTGCTGCCACTCAAGATGATTGGCGTGAAGAAAGTTCAAGGTGGAGCTCTGGAGGAATCTCAGCTGGTGGCTGGTGTGGCCTTTAAGAAGACCTTCTCCTATGCTGGCTTTGAAATGCAACCGAAACGCTATGACAACCCAAAGATCGCCCTCCTTAAcattgagctggagctgaaggcAGAAAAGGACAATGCTGAAGTTCGTGTCAAGAGTGTAGAGGACTACCAGGCCATAGTTGATGCTGAGTGGAATATACTGTATGATAAGCTGGAGAAGATCTACAAGTCTGGTGCCAAGGTGGTGTTGTCCAAGTTGCCCATTGGGGACGTGGCCACACAGTACTTCGCTGACAGAGATCTGTTCTGTGCTGGTAGAGTTCAGGAGGAGGATCTGAAGAGAACCATGATGGCCTGCGGTGGCTCCATCCAGACAAGTGTCGGCTCTCTCACTGATGACGTTCTTGGCCAGTGTGAGCTGTTTGAGGAGGTGCAGGTTGGAGGAGAGAGGTATAACTTCTTCAAAGGTTGTCCGAAGGCAAAGACCTGCACCATAATCCTCAGGGGAGGTGCTGAGCAGTTTATGGAGGAGACAGAGCGATCGCTGCATGATGCCATCATGATTGTGCGCAGAGCCATCAAGAATGACTCTATTGTGGCTGGAGGTGGCGCCATTGAGATGGAGTTGTCAAAGTACCTGAGGGATTATTCTAGGACCATCCCAGGAAAGCAGCAGCTGCTCATCGGAGCTTACGCAAAGGCCCTGGAAATCATCCCCAGGCAACTGTGCGATAATGCAGGCTTTGATGCTACCAATATCCTTAACAAACTCCGGGCTAAACACGCACAGGGTGGAATGTGGTATGGTGTGGATGTAAACAACGAGGACATCGCTGATAACTTCCAGGCCTGTGTGTGGGAGCCCGCAATCGTACGCATCAACGCCTTGACCGCTGCCTCAGAGGCTGCTTGTCTCATCCTCTCCGTAGACGAAACCATCAAGAACCCCCGCTCCGGCGGTGATGGCCCACCAGGACCTGCTGGTAGAGGAAGGGGACGCGGTAGACCCGCACACGCCCACTAAACCCCCCTCTCCCAGTATGCACACCAACCCTGGTCAGTCCAGGTCTTTAGATGTGTAGCTTCTGGACTGTTCTGTTTGAAGGTCAAAGGATGCCATCAGTTTTGATTCCATTTAACTTATCTTCATCTATAATGCTTGTGCTTATGGATATTGTAAGTAAGTGGAATTTAAAGCTGTGGCTGGATAGAGGCAGTTTGTTTTGTACAATTTGGAGACAACTAGTGTGTGCGCTGAAAAATATGGCTGTCTGATTTGTGAAACTGTAGAAGCACTGATGTTGGTTTGGGCGTTTAAGCCAGACTGCAGTATGTTCCCATGTTGGTCATTCAGTGGAACTATTTATTGGACCATTAAAGTCAAAACTTTCACATTTCA

Function

symbol description
cct7 Predicted to enable unfolded protein binding activity. Predicted to be involved in protein folding. Predicted to be located in cytoplasm. Predicted to be part of chaperonin-containing T-complex. Orthologous to human CCT7 (chaperonin containing TCP1 subunit 7).

NR:

description
T-complex protein 1 subunit eta

GO:

id name namespace
GO:0006457 protein folding biological_process
GO:0005737 cytoplasm cellular_component
GO:0005524 ATP binding molecular_function
GO:0051082 unfolded protein binding molecular_function

KEGG:

id description
K09499 CCT7; T-complex protein 1 subunit eta

RNA

RNA id representative length rna type GC content exon number start site end site
TU198225 False 316 TUCP 0.58 3 35399823 35402380
XM_007242039.3 True 2111 mRNA 0.50 11 35399778 35406330

Neighbor

gene id symbol gene type direction distance location
LOC103029357 plcb3,LOC108428576,LOC108267602 coding upstream 126759 35196256 ~ 35273019 (+)
LOC103039377 pcxb,LOC108428573,LOC108267638,LOC108412801,LOC107661088,LOC107721657,LOC107583287 coding upstream 351090 34681298 ~ 35048688 (+)
LOC103032224 LOC107583291 coding upstream 976639 34385330 ~ 34423139 (+)
rwdd4 rwdd4 coding upstream 1016034 34376722 ~ 34383744 (+)
LOC103039994 NA coding upstream 1207818 34189634 ~ 34191960 (+)
LOC103027680 paip2b,LOC103027680,LOC108428580,LOC108263850 coding downstream 56381 35462711 ~ 35478752 (+)
LOC103027364 dok1 coding downstream 87315 35493645 ~ 35517535 (+)
sema4f sema4f,LOC101074835 coding downstream 214814 35621144 ~ 35711214 (+)
col4a5 col4a5 coding downstream 460515 35866845 ~ 35926583 (+)
LOC103024410 LOC101154659,LOC107707922,LOC108412583,LOC105030858,LOC107684956 coding downstream 613114 36019444 ~ 36033264 (+)
G146475 slc8a4b,LOC108428577,LOC107569310,LOC107744276,LOC107721660,LOC107661969,LOC107583282,LOC108267603 non-coding upstream 106734 35282720 ~ 35293044 (+)
G146466 NA non-coding upstream 125678 35210385 ~ 35274100 (+)
G146457 ppp1r14b,LOC108268202 non-coding upstream 173510 35094361 ~ 35226268 (+)
G146441 NA non-coding upstream 645382 34753922 ~ 34754396 (+)
G146424 NA non-coding upstream 810612 34588967 ~ 34589166 (+)
G146490 hspa12b,LOC107697252,LOC107583310,LOC107721672,LOC107691462 non-coding downstream 517 35406847 ~ 35407624 (+)
G146492 hspa12b,LOC107583310,LOC107697252,LOC107721672,LOC107691462 non-coding downstream 2287 35408617 ~ 35409236 (+)
G146494 NA non-coding downstream 12996 35419326 ~ 35419986 (+)
G146499 NA non-coding downstream 28898 35435228 ~ 35435747 (+)
G146503 NA non-coding downstream 52717 35459047 ~ 35459460 (+)
LOC103033902 pcolce2,pcolceb,LOC108428564,LOC107711558,LOC107557504,LOC107677833,LOC107750313 other upstream 1321803 34067581 ~ 34077975 (+)
pcdh7 pcdh7,LOC107568147,LOC107684944,LOC107561555,LOC107681559,LOC107753999 other upstream 2295549 32879690 ~ 33104229 (+)
G146104 NA other upstream 2787216 32612125 ~ 32612562 (+)
trnae-uuc_22 NA other upstream 3328215 32071314 ~ 32071563 (+)
tbc1d19 tbc1d19,LOC107660707 other upstream 3473228 31892526 ~ 31926550 (+)
G146805 acadvl,LOC107731915,LOC107595296,LOC107675499 other downstream 1085182 36491512 ~ 36494457 (+)
acap1 acap1,LOC107595305,LOC107731905,LOC107683535,LOC107675497 other downstream 1284363 36690693 ~ 36719287 (+)
c16h4orf48 cunh4orf48 other downstream 1632605 37038935 ~ 37042227 (+)
G147496 NA other downstream 3208548 38614878 ~ 38615355 (+)
G147592 NA other downstream 3741269 39147599 ~ 39151200 (+)

Expression


Co-expression Network