G146499


Basic Information

Item Value
gene id G146499
gene name NA
gene type non-coding
species mexican tetra (Astyanax mexicanus)
category of species ornamental fish

Chromosome Information

Item Value
chromosome id NC_035912.1
NCBI id CM008315.1
chromosome length 41032606
location 35435228 ~ 35435747 (+)
genome version Astyanax_mexicanus-2.0_2017_mexican_tetra_Genome

Sequence

>TU198235
GGTGTTGATGACACAATGCTCTGCTCCTGCTTGACCAGCAATTTCCAGCTCTGTTTAAAGTCCTGCAGAAGTCCAGAGACCACAGAAGAGGAGAAACTTCCAGAGATGATGCTTCTGTGGCTACTGGAGGCTTTAGAGTGACGAAATTCCCAAACTCCCAAAGCCGGAGATTTCTGCAGAGCAgacaaaagaagaagaggaatgAGTGTGAGCTCTGAATGCTTTAGGAGCAGCAAAAAGTTCCAAACTAAAGTTTCCAAACTAAAGTCCAGCCCAGAGAGAATTCCTCTTACtctttccctctctctctctctctttcactctttcacagtctgtctctctctccctgtctccctTTCTCTGTGTTCCTCTCCTGCGCCTGTATCCAAGCACTCAATCCCTCAACTGCACTGGAATGTCAGGGAGGAAAGGGTGATAGAGTGGGagccacactctctctctatttctctctctctctctctctctctctctctctct

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU198235 True 498 lncRNA 0.48 2 35435228 35435747

Neighbor

gene id symbol gene type direction distance location
LOC103029357 plcb3,LOC108428576,LOC108267602 coding upstream 162209 35196256 ~ 35273019 (+)
LOC103039377 pcxb,LOC108428573,LOC108267638,LOC108412801,LOC107661088,LOC107721657,LOC107583287 coding upstream 386540 34681298 ~ 35048688 (+)
LOC103032224 LOC107583291 coding upstream 1012089 34385330 ~ 34423139 (+)
rwdd4 rwdd4 coding upstream 1051484 34376722 ~ 34383744 (+)
LOC103039994 NA coding upstream 1243268 34189634 ~ 34191960 (+)
LOC103027680 paip2b,LOC103027680,LOC108428580,LOC108263850 coding downstream 26964 35462711 ~ 35478752 (+)
LOC103027364 dok1 coding downstream 57898 35493645 ~ 35517535 (+)
sema4f sema4f,LOC101074835 coding downstream 185397 35621144 ~ 35711214 (+)
col4a5 col4a5 coding downstream 431098 35866845 ~ 35926583 (+)
LOC103024410 LOC101154659,LOC107707922,LOC108412583,LOC105030858,LOC107684956 coding downstream 583697 36019444 ~ 36033264 (+)
G146494 NA non-coding upstream 15242 35419326 ~ 35419986 (+)
G146492 hspa12b,LOC107583310,LOC107697252,LOC107721672,LOC107691462 non-coding upstream 25992 35408617 ~ 35409236 (+)
G146490 hspa12b,LOC107697252,LOC107583310,LOC107721672,LOC107691462 non-coding upstream 27604 35406847 ~ 35407624 (+)
G146475 slc8a4b,LOC108428577,LOC107569310,LOC107744276,LOC107721660,LOC107661969,LOC107583282,LOC108267603 non-coding upstream 142184 35282720 ~ 35293044 (+)
G146466 NA non-coding upstream 161128 35210385 ~ 35274100 (+)
G146503 NA non-coding downstream 23300 35459047 ~ 35459460 (+)
G146504 NA non-coding downstream 25259 35461006 ~ 35461789 (+)
G146500 NA non-coding downstream 50178 35485925 ~ 35486607 (+)
G146619 NA non-coding downstream 121021 35556768 ~ 35562922 (+)
G146622 NA non-coding downstream 150916 35586663 ~ 35587557 (+)
cct7 cct7,LOC107697251,LOC107721663,LOC107583281,LOC107744273,LOC107691460,LOC107571935,LOC102781788 other upstream 28898 35399778 ~ 35406330 (+)
LOC103033902 pcolce2,pcolceb,LOC108428564,LOC107711558,LOC107557504,LOC107677833,LOC107750313 other upstream 1357253 34067581 ~ 34077975 (+)
pcdh7 pcdh7,LOC107568147,LOC107684944,LOC107561555,LOC107681559,LOC107753999 other upstream 2330999 32879690 ~ 33104229 (+)
G146104 NA other upstream 2822666 32612125 ~ 32612562 (+)
trnae-uuc_22 NA other upstream 3363665 32071314 ~ 32071563 (+)
G146805 acadvl,LOC107731915,LOC107595296,LOC107675499 other downstream 1055765 36491512 ~ 36494457 (+)
acap1 acap1,LOC107595305,LOC107731905,LOC107683535,LOC107675497 other downstream 1254946 36690693 ~ 36719287 (+)
c16h4orf48 cunh4orf48 other downstream 1603188 37038935 ~ 37042227 (+)
G147496 NA other downstream 3179131 38614878 ~ 38615355 (+)
G147592 NA other downstream 3711852 39147599 ~ 39151200 (+)

Expression


Co-expression Network