G146424


Basic Information

Item Value
gene id G146424
gene name NA
gene type non-coding
species mexican tetra (Astyanax mexicanus)
category of species ornamental fish

Chromosome Information

Item Value
chromosome id NC_035912.1
NCBI id CM008315.1
chromosome length 41032606
location 34588967 ~ 34589166 (+)
genome version Astyanax_mexicanus-2.0_2017_mexican_tetra_Genome

Sequence

>TU198139
aaaaccccaacttagaacacagtacagtatttggtagtggcactcgatttactcagctttactcaacaagatttgagcatttcatcaagagaacttggacaaacagcttctcttatttcattaggatggctctggatggatcctaaaatggagcaccaccattcactgcagcttgagcctccttctctaccatgctctta

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU198139 True 200 lncRNA 0.42 1 34588967 34589166

Neighbor

gene id symbol gene type direction distance location
LOC103032224 LOC107583291 coding upstream 165828 34385330 ~ 34423139 (+)
rwdd4 rwdd4 coding upstream 205223 34376722 ~ 34383744 (+)
LOC103039994 NA coding upstream 397007 34189634 ~ 34191960 (+)
LOC103032728 lrch4,LOC108428567,LOC107661958 coding upstream 418722 34115141 ~ 34170245 (+)
LOC103033595 per1b,per1,LOC108428562,LOC107711564,LOC107684947,LOC107557521,LOC107677837 coding upstream 527000 34028450 ~ 34061967 (+)
LOC103039377 pcxb,LOC108428573,LOC108267638,LOC108412801,LOC107661088,LOC107721657,LOC107583287 coding downstream 92132 34681298 ~ 35048688 (+)
LOC103029357 plcb3,LOC108428576,LOC108267602 coding downstream 607090 35196256 ~ 35273019 (+)
LOC103027680 paip2b,LOC103027680,LOC108428580,LOC108263850 coding downstream 873545 35462711 ~ 35478752 (+)
LOC103027364 dok1 coding downstream 904479 35493645 ~ 35517535 (+)
sema4f sema4f,LOC101074835 coding downstream 1031978 35621144 ~ 35711214 (+)
G146284 NA non-coding upstream 376724 34180258 ~ 34212243 (+)
G146296 NA non-coding upstream 377646 34209142 ~ 34211321 (+)
G146269 NA non-coding upstream 387768 34076204 ~ 34201199 (+)
G146265 NA non-coding upstream 523458 34029326 ~ 34065509 (+)
G146243 NA non-coding upstream 684678 33882808 ~ 33904289 (+)
G146441 NA non-coding downstream 164756 34753922 ~ 34754396 (+)
G146457 ppp1r14b,LOC108268202 non-coding downstream 505195 35094361 ~ 35226268 (+)
G146466 NA non-coding downstream 621219 35210385 ~ 35274100 (+)
G146475 slc8a4b,LOC108428577,LOC107569310,LOC107744276,LOC107721660,LOC107661969,LOC107583282,LOC108267603 non-coding downstream 693554 35282720 ~ 35293044 (+)
G146490 hspa12b,LOC107697252,LOC107583310,LOC107721672,LOC107691462 non-coding downstream 817681 35406847 ~ 35407624 (+)
LOC103033902 pcolce2,pcolceb,LOC108428564,LOC107711558,LOC107557504,LOC107677833,LOC107750313 other upstream 510992 34067581 ~ 34077975 (+)
pcdh7 pcdh7,LOC107568147,LOC107684944,LOC107561555,LOC107681559,LOC107753999 other upstream 1484738 32879690 ~ 33104229 (+)
G146104 NA other upstream 1976405 32612125 ~ 32612562 (+)
trnae-uuc_22 NA other upstream 2517404 32071314 ~ 32071563 (+)
tbc1d19 tbc1d19,LOC107660707 other upstream 2662417 31892526 ~ 31926550 (+)
cct7 cct7,LOC107697251,LOC107721663,LOC107583281,LOC107744273,LOC107691460,LOC107571935,LOC102781788 other downstream 810612 35399778 ~ 35406330 (+)
G146805 acadvl,LOC107731915,LOC107595296,LOC107675499 other downstream 1902346 36491512 ~ 36494457 (+)
acap1 acap1,LOC107595305,LOC107731905,LOC107683535,LOC107675497 other downstream 2101527 36690693 ~ 36719287 (+)
c16h4orf48 cunh4orf48 other downstream 2449769 37038935 ~ 37042227 (+)
G147496 NA other downstream 4025712 38614878 ~ 38615355 (+)

Expression


Co-expression Network