oxa1l


Basic Information

Item Value
gene id oxa1l
gene name NA
gene type coding
species mexican tetra (Astyanax mexicanus)
category of species ornamental fish

Chromosome Information

Item Value
chromosome id NC_035912.1
NCBI id CM008315.1
chromosome length 41032606
location 31522021 ~ 31527907 (+)
genome version Astyanax_mexicanus-2.0_2017_mexican_tetra_Genome

Sequence

>XM_022678424.1
ATTGTCCCTTCTGCCGCTCCGTCCGTCCGCCCCGCTGTTCTGTTCCAACATGGCTGCGCTCAGGGGCAGAGGGGTGCCTGGCTGTTTAACGACGAGATTATTAAAACAGATCAACACAGCGGgcgtttcagcgctgcccgcggcggCCGCGCGGAGCGGGTATTTTGAACAGAAATCACATCTTCACACGGTCAGAAGAAGCAGTGGTCCTTTCATCCAGGCCCTAATAGGCTGCCATAACCATGGACGGATACTGCTGGTCAGTGCTGTGGCAGTGCGCCATAACAGCTCACAGATGGCAGGTGAAACAGTGCTTGTTGTTAACCCACCAACAGACACACCAACACCTCTTTCAGCATCCACACCCGTCGCTGACCCCACACCCATTGCTGACCCCACACCTGTCATTTACTCCACACCTGTCGCTGACCCCACACCGGTACTCACACAGTCAGTAACAGAACAAATTGTGGAGGCCCCTGTCACGGCAATGGATGTCCTGCAGGAGGCAGGAGCAGAACTCAGCCTAACTGATTTGGGTCTCGGAAACTACACACCAGTGGGCCTGATTCAGAACTTATTGGAATTCATGCATGTCAACATTGGGCTTCCATGGTGGTGTGCCATCGTTGCAGGTACCATCATAGCTCGCTGTGCTGTGTTCCCGGCTATTGTAAAGGGCCAGCGAGAGGCAGTTAAGTTAAACAACGTCCTTCCAGAGATGACGAAGATAAGCAATCGCATGAACGAGGCAAAGCATAGCGGCAACAAATTTGAGTTTTCTAAGGCATACTCTGAATTGATGATGTTCTATAAGAAGCATGATGTGAACCCTGTTCGTGGGTTCCTGGTGCCTTTGGTGCAGgCACCAGTTTTTATCTCCTTCTTCATAGCCTTGCGTCAGATGGCCTATCTGCCTGTGCCCAGTTTGCAGACAGGCGGTTTGGGATGGTTCACAGACTTAACTGCAGCAGACCCATATTTTATTCTTCCATTTGCAGTCACTGGAACAATGTTTGCAATTGTGGAGTTGGGGGCAGAGTCTGGTCTTGACAATCCAAATCTGAGAGCAATGAAGACGGTCTTCAGAATCATGCCACTTGTCATCTTGCCAATGACTATTAACTTTCCTACGgcGGTGTTTGTCTACTGGTTGACCTCAAACGTCTTCTCTCTGGGTCAGGTTGCCTTGCTGAGGCATCCTGCAGTGAGGAAGAAGTTGCGCATCCCAGAACGGAAAACTCACCCTCCGTCTGCACTGCCTCCTAATGAGGGCTTTATTAAGAGCATCAAGAAAGGAATTCATAATGCCCAGTTGGCTCAGCagctggaagagagagagaagaggattAAGGGACACCTTGACATGGCATCAAAAGGCCCTCTGAGGCAGACCTTTGCCCACAATCCCCTTCAGCAGACATCAGCATCCATGTCTACAGCGAAACTGCCCAGTCCAAAGCAAGGACAACAAACAGGACAACAAGCAAAACAGCAAGAAAGTGGAAAGAAGCGGCCCTGGGAGGAAACGATAGGTTAAAAGCTAAAAGCAGACACTTTGTACTctaatttgtatatatttatgaagAGATGGAGGAAACGGAAAAAGAGAAGAATAATGAGCGCTGGGAGGGATGCAGTTGTTGTACTTAATACATGTTCATACCAACAATATTAAAAAGGTATCTGATTACCTTTA

Function

NR:

description
mitochondrial inner membrane protein OXA1L-like

GO:

id name namespace
GO:0051205 protein insertion into membrane biological_process
GO:0016021 integral component of membrane cellular_component

KEGG:

id description
K03217 yidC, spoIIIJ, OXA1, ccfA; YidC/Oxa1 family membrane protein insertase

RNA

RNA id representative length rna type GC content exon number start site end site
XM_022678424.1 True 1699 mRNA 0.49 11 31522021 31527907

Neighbor

gene id symbol gene type direction distance location
LOC103022147 NA coding upstream 11345 31506176 ~ 31510676 (+)
znf638 NA coding upstream 31516 31459269 ~ 31490505 (+)
LOC103039501 NA coding upstream 183240 31301201 ~ 31338781 (+)
LOC103040428 LOC108434604 coding upstream 230094 31283811 ~ 31291927 (+)
LOC103040122 LOC103040122,LOC108434605 coding upstream 240250 31275085 ~ 31281771 (+)
ccnb1ip1 ccnb1ip1 coding downstream 35871 31563778 ~ 31566738 (+)
man2b2 man2b2 coding downstream 44334 31572241 ~ 31584973 (+)
acox3 acox3 coding downstream 69439 31597346 ~ 31619532 (+)
LOC103032972 LOC103032972 coding downstream 138892 31666799 ~ 31670129 (+)
LOC103032447 LOC108428553,LOC106608959,LOC103364796 coding downstream 156321 31684228 ~ 31707955 (+)
G145837 NA non-coding upstream 16524 31503507 ~ 31505497 (+)
G145843 LOC103036756,LOC108434598 non-coding upstream 21515 31499125 ~ 31500506 (+)
G145829 NA non-coding upstream 113050 31406500 ~ 31408971 (+)
G145813 LOC103038355,LOC108434587,LOC108267728 non-coding upstream 153525 31364272 ~ 31368496 (+)
G145720 NA non-coding upstream 305766 31215435 ~ 31216255 (+)
G145854 NA non-coding downstream 22626 31550533 ~ 31552109 (+)
G145859 ttc5,LOC107738047 non-coding downstream 39030 31566937 ~ 31567882 (+)
G145868 NA non-coding downstream 96815 31624722 ~ 31626962 (+)
LOC111194381 NA non-coding downstream 99133 31627040 ~ 31632925 (+)
G145875 NA non-coding downstream 120619 31648526 ~ 31649885 (+)
G145748 mus81 other upstream 167577 31352296 ~ 31354444 (+)
G145711 chd3 other upstream 299687 31197218 ~ 31222334 (+)
LOC103044823 NA other upstream 391998 31063439 ~ 31130023 (+)
LOC103022860 LOC103022860 other upstream 607184 30911831 ~ 30914837 (+)
G145543 NA other upstream 849834 30668799 ~ 30672187 (+)
smim20 NA other downstream 189235 31717142 ~ 31719051 (+)
tbc1d19 tbc1d19,LOC107660707 other downstream 364619 31892526 ~ 31926550 (+)
trnae-uuc_22 NA other downstream 543407 32071314 ~ 32071563 (+)
G146104 NA other downstream 1084218 32612125 ~ 32612562 (+)
pcdh7 pcdh7,LOC107568147,LOC107684944,LOC107561555,LOC107681559,LOC107753999 other downstream 1351783 32879690 ~ 33104229 (+)

Expression


Co-expression Network