LOC103022147


Basic Information

Item Value
gene id LOC103022147
gene name NA
gene type coding
species mexican tetra (Astyanax mexicanus)
category of species ornamental fish

Chromosome Information

Item Value
chromosome id NC_035912.1
NCBI id CM008315.1
chromosome length 41032606
location 31506176 ~ 31510676 (+)
genome version Astyanax_mexicanus-2.0_2017_mexican_tetra_Genome

Sequence

>XM_022678430.1
ATTTGAAAGCTAGGTGCATGGCTTAGTCCTTAGAGCTCTGTGTTGCATTTTTTAATACACCTAGCTAGTGTTTGGTTTGAACTTAATGGCTTAGCAATGTAACAAAACTGGTTGACCTATGTGATTTAAACCACCTGGAGCATTGTAAAGGTAGATTTGAAAAGCTAAATTAGACTTTTAAGCTGTTTCATTTTTTCAGTAAGAAATTGTAGGCTATGTACTGAGGGTGGAAGTTTTAAACTGAACTGTGTGGAATTTACCTGAACCAGATGTACATGTAGTTTCAGACAACTAATTTCCTCTTTGCTCACACGACAGCAGTTTTCTGAACCCTTTAAAGCGTTGAAGTGAAACTGAAACGGCCAGAGCTATTTCATCTAGCTCTGTGCGCTTTGTAAACAGGTTTTTTTGCTTTGTAAAAGACAAGAGATCGTTACTCGGCGGTGTTATGGGGTGCGTTTTAAGTCTATTGCGAAAACTTGCAGCAAATCCATTTGAACAAAAAAGCCCCAGGCATGGAGCCATTACATACAATGGCTTAATAAATCAGGGCTCAACCTGCTACCTAAACACAGTGCTACAGTGTCTCTGCATGACCAAAGACTTCAGAACAGCAGTGGAGAACTTTCAACCAGGACAGAATGACTCCCACCAGGGAAGAACTGATCTGTTAATACAGCTGCAACAACTGTTTGAAACACTTAAAGAGACTCAAGGCACCACTCAAGGGATAATTAAAAGTTTGGGCATCAAGAGTGTGTATAAGCAGCAAGATGCAGTGGAATACTATCAGAAAATCGTAAAAGCAGTTGGGCCACCAGCATCACAGGTGTTTGAAGGGAAAATGAGCAACAAAAGCGAATGTGTGCAAAGCCACATTTTTCAGGAGAGTTGTTCCTTCATCACAATCCCTCTAGCCATAGAATGTGGAGACGATGAGTTGTACAAAGTGGTGGAGGGATTTGaggctttttttaaacattcaaagTTAGATGAAGACAACTGGTTGTACTGTGACGAATGTGACCAAAAAGCAGAATCAGAGACTTGGACTGAAATAGAGGAGATTCCTACAGTCTTGACTCTACATCTGAAGAGGTTTTACTTTGACTACACACAGATGAAGCATGTGAAGAATCACTGTTCTGCTGACATTCCTTCAACTCTACAAGTTAAAGACTACAAATACGATCTTTATGCGGTTATTAACCACATAGGCAATCAGAGTGGAGGCCACTACAATGCTGTCATCAAATCTTTTGAAGACAATCTGTGGTACTGTTTTGATGACAAGTCTGTCATGCAGACGGATGGCTTTCCCCAAAGtTCACAGCTGCCCTACTTACTGATGTACAAACTGCAAAGAGCACAAGGATCATGGAGAAGTTATGCACTGCATAAACTCAAACAACCTTGTgtttcattatattatttttgttcatttgttcgTATATTTGTAGGTTTGTTCGGCATTATCAGTATTTGTCTGTATATGCCTGGAATTTTAAGGTCTCTTAGATCCAGACTTTGCAGGTTGGTTAGGTTTTTGTGAGGCATGATGGCAGAAACAACAAGAAATCAAGGAGTATTAAATCAAAATCAattacattacgttacatttggcagacacttttgtccaaagtgacttacaataatgatgtacatatagtaataaa

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
XM_022678430.1 True 1676 mRNA 0.39 11 31506176 31510676

Neighbor

gene id symbol gene type direction distance location
znf638 NA coding upstream 15671 31459269 ~ 31490505 (+)
LOC103039501 NA coding upstream 167395 31301201 ~ 31338781 (+)
LOC103040428 LOC108434604 coding upstream 214249 31283811 ~ 31291927 (+)
LOC103040122 LOC103040122,LOC108434605 coding upstream 224405 31275085 ~ 31281771 (+)
snx15 snx15,LOC102775858 coding upstream 236668 31259570 ~ 31269508 (+)
oxa1l NA coding downstream 11345 31522021 ~ 31527907 (+)
ccnb1ip1 ccnb1ip1 coding downstream 53102 31563778 ~ 31566738 (+)
man2b2 man2b2 coding downstream 61565 31572241 ~ 31584973 (+)
acox3 acox3 coding downstream 86670 31597346 ~ 31619532 (+)
LOC103032972 LOC103032972 coding downstream 156123 31666799 ~ 31670129 (+)
G145837 NA non-coding upstream 679 31503507 ~ 31505497 (+)
G145843 LOC103036756,LOC108434598 non-coding upstream 5670 31499125 ~ 31500506 (+)
G145829 NA non-coding upstream 97205 31406500 ~ 31408971 (+)
G145813 LOC103038355,LOC108434587,LOC108267728 non-coding upstream 137680 31364272 ~ 31368496 (+)
G145720 NA non-coding upstream 289921 31215435 ~ 31216255 (+)
G145854 NA non-coding downstream 39857 31550533 ~ 31552109 (+)
G145859 ttc5,LOC107738047 non-coding downstream 56261 31566937 ~ 31567882 (+)
G145868 NA non-coding downstream 114046 31624722 ~ 31626962 (+)
LOC111194381 NA non-coding downstream 116364 31627040 ~ 31632925 (+)
G145875 NA non-coding downstream 137850 31648526 ~ 31649885 (+)
G145748 mus81 other upstream 151732 31352296 ~ 31354444 (+)
G145711 chd3 other upstream 283842 31197218 ~ 31222334 (+)
LOC103044823 NA other upstream 376153 31063439 ~ 31130023 (+)
LOC103022860 LOC103022860 other upstream 591339 30911831 ~ 30914837 (+)
G145543 NA other upstream 833989 30668799 ~ 30672187 (+)
smim20 NA other downstream 206466 31717142 ~ 31719051 (+)
tbc1d19 tbc1d19,LOC107660707 other downstream 381850 31892526 ~ 31926550 (+)
trnae-uuc_22 NA other downstream 560638 32071314 ~ 32071563 (+)
G146104 NA other downstream 1101449 32612125 ~ 32612562 (+)
pcdh7 pcdh7,LOC107568147,LOC107684944,LOC107561555,LOC107681559,LOC107753999 other downstream 1369014 32879690 ~ 33104229 (+)

Expression


Co-expression Network