G89751


Basic Information

Item Value
gene id G89751
gene name NA
gene type unknown
species mexican tetra (Astyanax mexicanus)
category of species ornamental fish

Chromosome Information

Item Value
chromosome id NC_035906.1
NCBI id CM008309.1
chromosome length 35377769
location 10223520 ~ 10224663 (-)
genome version Astyanax_mexicanus-2.0_2017_mexican_tetra_Genome

Sequence

>TU120738
aaaaggacacttggagatgcccaaaaggacactcggagatctccaaaaggacacttggagatctccAAACGGACCctcggagatgcccaaaaggccACTCGGAGATCTcagaaaggacacttggagatgccaaaaaggacactcggagatgcccaaaaggacactcggAGATgcccaaaaggacacttggagatgcccaaaaggacactcggAGATCTCCGAAAGGACActcggagatgcccaaaaggacacttggagatctccaaaaggacacttggagatgccaa

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU120738 True 287 TUCP 0.51 2 10223520 10224663

Neighbor

gene id symbol gene type direction distance location
LOC103024028 kcnj14,LOC107550821,LOC107749008,LOC107685531,LOC107596661 coding downstream 31722 10165676 ~ 10191798 (-)
LOC103039091 LOC108429041 coding downstream 62524 10106091 ~ 10160996 (-)
LOC103039397 LOC103039397 coding downstream 125074 10095776 ~ 10098446 (-)
rpl18 rpl18 coding downstream 129107 10090404 ~ 10094413 (-)
LOC103024539 NA coding downstream 146966 10071635 ~ 10076554 (-)
LOC103022457 sema6c,LOC108429044 coding upstream 24636 10249299 ~ 10424477 (-)
tmod4 tmod4,LOC107663362,LOC107689841 coding upstream 439811 10664474 ~ 10682439 (-)
LOC103046057 NA coding upstream 500751 10725414 ~ 10728744 (-)
LOC103044830 LOC103044830 coding upstream 566594 10791257 ~ 10795440 (-)
LOC103044235 catk,LOC108441922,LOC107576564 coding upstream 579819 10804482 ~ 10811848 (-)
G89732 NA non-coding downstream 157514 10064160 ~ 10066006 (-)
G89715 NA non-coding downstream 222605 9984872 ~ 10000915 (-)
G89709 NA non-coding downstream 257071 9965409 ~ 9966449 (-)
G89698 nop2,LOC107749104,LOC107699935,LOC107685519 non-coding downstream 295703 9924873 ~ 9927817 (-)
G89696 emg1,LOC107699927,LOC107744679,LOC107748869,LOC107748863,LOC107685516 non-coding downstream 305503 9914930 ~ 9918017 (-)
G89766 NA non-coding upstream 227906 10452569 ~ 10453464 (-)
G89768 NA non-coding upstream 235774 10460437 ~ 10460823 (-)
G89769 NA non-coding upstream 239002 10463665 ~ 10464175 (-)
G89770 NA non-coding upstream 270176 10494839 ~ 10495048 (-)
G89773 NA non-coding upstream 308870 10533533 ~ 10535075 (-)
LOC103025178 LOC108429038 other downstream 180667 10011817 ~ 10042853 (-)
G89708 gapdh,LOC107550818 other downstream 258914 9961282 ~ 9964606 (-)
G89690 zyx,LOC108428910 other downstream 321820 9894825 ~ 9901700 (-)
LOC103029706 LOC108429024,LOC108268385,LOC107749226,LOC107685514 other downstream 369421 9784623 ~ 9854099 (-)
G88789 NA other downstream 2980950 7241711 ~ 7242570 (-)
lysmd1 lysmd1 other upstream 430808 10655471 ~ 10659606 (-)
vps72 vps72,LOC107571619 other upstream 457693 10682356 ~ 10695334 (-)
LOC103045558 ensab,LOC103045558,LOC108441925,LOC108268136,LOC107741750,LOC107663348,LOC107587831,LOC107597988 other upstream 508272 10732935 ~ 10743717 (-)
LOC103031398 dgat1b,LOC108436588,LOC108267870,LOC107741726,LOC107552801,LOC107671724,LOC107724797 other upstream 1383808 11608471 ~ 11630001 (-)
LOC103024123 LOC108436541 other upstream 1937625 12162288 ~ 12169694 (-)

Expression


Co-expression Network