G90365


Basic Information

Item Value
gene id G90365
gene name NA
gene type non-coding
species mexican tetra (Astyanax mexicanus)
category of species ornamental fish

Chromosome Information

Item Value
chromosome id NC_035906.1
NCBI id CM008309.1
chromosome length 35377769
location 12484007 ~ 12485343 (-)
genome version Astyanax_mexicanus-2.0_2017_mexican_tetra_Genome

Sequence

>TU121580
TAGTTTAAGGAAGTGTTATGTGTTCAGTGAGTGAAATGGGGGATTGCACTTACTCCCAGAGCTACAGGTACTCCCCTCAGGAATGTACTGGTCATGGAGGGCTTGCTCGGTTTATTCTCGCTCTGTTTGCTGTCTTTGCTCTGAGTGGGACATGGTGGCTCAGGGGTCTCCAGCGGGATGATGTGGGTCACCACTCGAACCCCATGAGCAGCAGTGGAAACTGAGGTTGCCATTTCTGGAGATTGTCTGGTAGTCAGATCTGCAAAAcAAACACGCGCTCGCTCGTCCGTTTCTGCCAGGTGCTTCTGTGAACTCTg

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU121580 True 317 lncRNA 0.52 2 12484007 12485343

Neighbor

gene id symbol gene type direction distance location
dcst2 NA coding downstream 72184 12394273 ~ 12411823 (-)
LOC103036879 NA coding downstream 99120 12365737 ~ 12384887 (-)
LOC103047577 LOC103047577,LOC108436568,LOC107717807,LOC107579407,LOC107681572,LOC107689872,LOC107741770,LOC105028477 coding downstream 120211 12361949 ~ 12363796 (-)
LOC103021619 NA coding downstream 192314 12286442 ~ 12291693 (-)
LOC103022666 npr1b,LOC103022666,LOC108436575,LOC108273580,LOC107741766,LOC107689868,LOC107681586,LOC107717786,LOC106605459 coding downstream 219501 12199653 ~ 12264506 (-)
muc1 NA coding upstream 31862 12517205 ~ 12526957 (-)
polr3gl polr3gl,LOC107714326,LOC107666760,LOC107592290 coding upstream 138502 12623845 ~ 12633606 (-)
LOC103037451 gatad2b,LOC108436554,LOC108270204 coding upstream 189828 12675171 ~ 12718006 (-)
LOC103038418 LOC108436530,LOC108262988,LOC106580249,LOC107567515,LOC105908886 coding upstream 319327 12804670 ~ 12831851 (-)
dennd4b dennd4b,LOC106605454,LOC106580258 coding upstream 356568 12841911 ~ 12891916 (-)
G90361 NA non-coding downstream 1037 12481937 ~ 12482970 (-)
G90316 NA non-coding downstream 122359 12360803 ~ 12361648 (-)
G90315 NA non-coding downstream 123292 12360130 ~ 12360715 (-)
G90314 NA non-coding downstream 123945 12359522 ~ 12360062 (-)
G90313 NA non-coding downstream 124975 12358801 ~ 12359032 (-)
G90405 NA non-coding upstream 26660 12512003 ~ 12514674 (-)
LOC111193333 NA non-coding upstream 100100 12585443 ~ 12587548 (-)
G90429 NA non-coding upstream 116164 12601507 ~ 12603115 (-)
G90438 NA non-coding upstream 152746 12638089 ~ 12638324 (-)
G90547 NA non-coding upstream 307100 12792443 ~ 12792955 (-)
LOC103024123 LOC108436541 other downstream 314313 12162288 ~ 12169694 (-)
LOC103031398 dgat1b,LOC108436588,LOC108267870,LOC107741726,LOC107552801,LOC107671724,LOC107724797 other downstream 854006 11608471 ~ 11630001 (-)
LOC103045558 ensab,LOC103045558,LOC108441925,LOC108268136,LOC107741750,LOC107663348,LOC107587831,LOC107597988 other downstream 1740290 10732935 ~ 10743717 (-)
vps72 vps72,LOC107571619 other downstream 1788673 10682356 ~ 10695334 (-)
lysmd1 lysmd1 other downstream 1824401 10655471 ~ 10659606 (-)
LOC103038102 iqgap3,LOC106605450,LOC105031059,LOC105908924 other upstream 235626 12720969 ~ 12743217 (-)
G90571 mpp6,LOC108267518,LOC108436535,LOC107596657,LOC107749029 other upstream 465269 12950612 ~ 12967291 (-)
LOC103029309 osbpl3,osbpl3b,LOC108441521,LOC107678127,LOC107550826,LOC107685532 other upstream 536652 13021995 ~ 13135114 (-)
G90788 NA other upstream 1772612 14257955 ~ 14258956 (-)
LOC103022461 NA other upstream 2639170 15124513 ~ 15130106 (-)

Expression


Co-expression Network