LOC103038102 (iqgap3,LOC106605450,LOC105031059,LOC105908924)


Basic Information

Item Value
gene id LOC103038102
gene name iqgap3,LOC106605450,LOC105031059,LOC105908924
gene type misc
species mexican tetra (Astyanax mexicanus)
category of species ornamental fish

Chromosome Information

Item Value
chromosome id NC_035906.1
NCBI id CM008309.1
chromosome length 35377769
location 12720969 ~ 12743217 (-)
genome version Astyanax_mexicanus-2.0_2017_mexican_tetra_Genome

Sequence

>TU121796
ACCCGGGAGCCAATGGGATCGCGGCGGGACATTCAAACCTGTCGGAGAGTAAACAGTCACCTCAGCGTTCAAACCAGGGATTCAAGCCTCCGCGTTGTTTTTCCTTCAGGGAGTGTCAAACCTGCGTCTAGGTCGTTAACGTCTTTAGTTTAACGTTTTAGCTTAGTTAACTAGTTTACCTTTTAGCTGCGTCTCttttttagctttagtttaaGTTAATATTAATAGCTAGATAGGTCAGTACGTTTGTATTTTGCTAgatagttaacgttagctaggctAGTTTTCTGCTGTTTTCGGATTGACTGGGCGACAGTATTTTAGCTGAGCTAGTTAGTTTGCTGACAAGTTCTCGTAAATaagtgtgtttgtttaaaaactgaaacaaCGGAGAAATGGGAGAATCCGGGGTTCAGCAGCGGTCTGGCTATGAACGCCTGACTGCAGAAGAAATGGATGAACAACGCATCCAAAATGTGGCTTACCAGTATCTGTGCCGCCTAGAAGAGGCAAAGAGGCA
>TU121797
AGTCACCTCAGCGTTCAAACCAGGGATTCAAGCCTCCGCGTTGTTTTTCCTTCAGGGAGTGTCAAACCTGCGTCTAGGTCGTTAACGTCTTTAGTTTAACGTTTTAGCTTAGTTAACTAGTTTACCTTTTAGCTGCGTCTCttttttagctttagtttaaGTTAATATTAATAGCTAGATAGGTCAGTACGTTTGTATTTTGCTAgatagttaacgttagctaggctAGTTTTCTGCTGTTTTCGGATTGACTGGGCGACAGTATTTTAGCTGAGCTAGTTAGTTTGCTGACAAGTTCTCGTAAATaagtgtgtttgtttaaaaactgaaacaaCGGAGAAATGGGAGAATCCGGGGTTCAGCAGCGGTCTGGCTATGAACGCCTGACTGCAGAAGAAATGGATGAACAACGCATCCAAAATGTGGCTTACCAGTATCTGTGCCGCCTAGAAGAGGCAAAGAGGCA
>XM_007237738.3
CGGAGAGTAAACAGTCACCTCAGCGTTCAAACCAGGGATTCAAGCCTCCGCGTTGTTTTTCCTTCAGGGAGTGTCAAACCTGCGTCTAGGTCGTTAACGTCTTTAGTTTAACGTTTTAGCTTAGTTAACTAGTTTACCTTTTAGCTGCGTCTCttttttagctttagtttaaGTTAATATTAATAGCTAGATAGGTCAGTACGTTTGTATTTTGCTAgatagttaacgttagctaggctAGTTTTCTGCTGTTTTCGGATTGACTGGGCGACAGTATTTTAGCTGAGCTAGTTAGTTTGCTGACAAGTTCTCGTAAATaagtgtgtttgtttaaaaactgaaacaaCGGAGAAATGGGAGAATCCGGGGTTCAGCAGCGGTCTGGCTATGAACGCCTGACTGCAGAAGAAATGGATGAACAACGCATCCAAAATGTGGCTTACCAGTATCTGTGCCGCCTAGAAGAGGCAAAGAGGTGGATGGAGACCTGCTTAAATGAGGAGCTCCCAGCACCGACTGAGCTGGAGGAGGCTCTGAGGAATGGGGTACTCTTGGCAAAGCTTGGCCACTGCTTTGCTCCAAACGTTGTTCCCCTGAAGAAGATCTATGATCTGGACCAGGAACGTTACAAGGCAACAGGCCTGCAGTTCCGTCACACTGATAACATCAACCACTGGAGGAATGCCATGGCAGAGGTTGGACTACCAACAATTTTTCATCCTGAGACCACTGATATATATGACAAGAAGAATATGCCCCGAACGGTCTACTGTATCCATGCTCTCAGCCTTTACCTCTTTCGTTTGGGACTGGCTCCTCAAATCCATGACCTGTGCGGCAAAGTCAAATTTACAGAGGAAGAAATTAACAACATGAAGAGGGAACTGGATAAATATGGGATTCAAATGCCTGCTTTCGGCAAGATTGGGGGAATTCTTGCAAATGAACTCTCTGTGGATGAGGCTGCTGTGCATGCAGCAGTGATCGCCATTAACGAGGCAGTGGAGCGAGGCTGTGTGGAGGACACAGCGCAGGCCCTGCGCAACCCCAACGCCATGCTGGTTAACCTGCAGGAACCACTCATGGCCATCTACCAGGAGATGCTACGTCAGGCTCGTGCTCACAAAGCGGCTCAGGCATCGGTTAAAGTGAATGGCTCCATGGAGAAAGATATCTATGAGGAGTATCTGACACAGAGTGAAATTCAGGACTGCATCACTAAAGTTAATGTGAGGgcagctgtggagtgtgtggatgagGCTATAGAATGTGGCGATTCCCTTGCTTTGCTCTCGGCCCTGCAGAGCCCAAGCCTGGCCCTCAGGGGGCTTCTCAGAGACCACGCAGACTGGTACCTGGAACAGCTTACGTCAGACAGAGAACAGAAAGCCCTGGATCTGGGCTGTGTGGACCCTCTGGACAGAGATGAGCTGCAGGAAGGAGTCAGTGTTGCCAATGAGGATGCTCAACGCTCCCAAACTATGCTGCAGGCTGTGTCCAAAATCAATGAGGCTCTCCGTTGTGGGGAGGCACGTCAGACAGTTCGTGCCCTGATGAATCCAGATGCCCACCTCCCAGACGTCTACCCCTTTGCAGCTGAGCTCTACCAGAAAGAGCTCGCACCACTGCAGCAACAATGCCCTCAGggTGAGCTACAACAGGAGGAGCTGTTTGTGGCTGTAGAAATGCTTTCTGCTGTGGCTCTGGTAAACCAGGCACTGGAGGCTAAGGACACAGGAGCGTTTTGTGCTACGCTGGTCAGCCCTTCTGCCGGCCTTTCTGACCTCGATGATGGTTTAATGCAAAGGTACTTTGAGGAGCTGGTTGAGTTGAAGAGGAAGGAGGGCCGAGCTCTCCTGACCTGGAATGAGCTGCAGAGCGGACTGAACAGTGTGAATGTAGCAGCTCAGGAGGAGCATGACCAGATCCTGACCATAGAATTGATCAACCAGGCACTCTGTAGGAATGAGCCTCAGAAAACACTGGCTGCGCTGCTGCTGCCCTCTAGCGGATTAAAGGACGTACTGCCGCAAAACTGCAAACGCTACCATGATGTGCTGACCCGTATCAAGAAGCGCAAagcagagCTCAGTCGGGACCCTGCAGCAGAGCTGTGGTTGGCAGACATTCAGGAGGGAGTGAGACTGGCCAACCAGGATACTCAAAGAGCACTGAAGATGTCTCTGGGTCTGGCCGCTGTCAATCAGGCAGTGAAGGAAGGAAAGGCATCTCAGACTCTGCGAGTTCTGCGTCTCCCTGAAGTGGCGCTGCGGAGTGTGGTGTCCGAGTGTGCAGAGGGGTATCAGACTGAGTTGGGTGCCCTACTTCGTGCAAAAGCCTTGGAAGGTGATAACAGAAGTCCATGGTTGAAGACTAAGACTCCAGATGGCAGCTCGTACTACTTCCACCTGCAGAAGCTGGAGGGCACCTGGGACAGACCTCAGGGCTTTGTTCAGAACAGCATCTTCCTCAATTATGAAGAGGTCCAGgctgtgtgtagtggtgtaacTGTGGCCCACAGTAGAGAGGTGCAGTGGAAGGCCTGTGAGCCactggtgctgcagctgcaggcCCGAGCAAGAGGATTCCTCCTTAGACAGAAACTTTCAGAACGCCTGCATTTCCTCAACACGCATCTGCCTGCCATCGTTACCATTCAGTCTCACTGGCGGAGGGTTCTGCAGCAGAGGGCCTATAGAGAGAGGCTGCAGTATCTTTACCAGAACTGGAGAGCAGTGGTCAAGATTCAGGCTACAGTTAAGATGTGGCAGGCTCGAAGGGCTTACCTGGCTCGCCTGCGCTACTTCAGAAGACATGTTGGGGCCATTATAAAGATTCAGGCTTTCTTCAGGGCCAGTAAAGCTCGTGAAGAGTACAGGATGCTGGTACACTCCAGCACACCACCCCTGTCTGTGGTGCGCAAGTTTGCCCACCTGTTAGAGTTGGGGGATAACGATATCCGTCAGGAGGGGGAGCTGCTGCGTCTACGAGAAGAGGTGGTACGCACCATCCGCTCTAATAGGCAGCTGGAGTCAGACCTGGACCTTATGGACCTGAAGATCGGTTTGCTGGTCCGCAACCGTGTCACGCTGCAGGAGGTGGTGTCCCATCATAAAAAACTAACCAAGAAGAATAAAGAAGAGCTGTCTGACATGATGGCACTAGAGAAGAATAAAGGCCTGAAGTCTTTAAGTAAAGACAAACGTGAGAAACTGGAGACATACCAGCACCTTTTCTACCTGCTGCAGACCCAGCCTTCATACCTGGCCCAGCTCATCTTCCTGATGCCACAGAATAAGAGCACAAGCTTCATGGAGACTGTGATCTTCACTCTCTTTAATTACGGCTCTGATTGTAGAGAGGCCTACCTACTCCTGCAGCTCTTTACTGCTGCTCTGCGCCACGAGATCAAACTGAAGGTAGACCAACCTCAGGAGGTTGTGACTGGGAACCCTACAGTCATAAAGATGTTGATCAGCTTCTATCGTCACGCCCGTGGCCAGAACGCCCTGAAGGAGATCCTGGGGCCGGCAGTGCGTGAGGTTCTGCAGGACCGCACACTCAGTATTCGCACGGACCCTGTTGAAATTTACAAGAGCTGGATTAACCAGACTGAGAGCAAGACTGGCCACAAGAGCTCCCTGCCGTATGAGGTGAGTGCAGAGGAAGCTCTGAGCCACCCAGAAGTACAGCAGCGCTTGAACATCGCCATCACTAACCTGAAGAGTCTGACTGACCGCGTACTCAACGCCATCACCAGCAACATCCACAAACTGCCGTATGGGTTACGGTACACTGCTAAAGTTCTGAGGGACTCCCTGCATGAGAAGTTTCCTCAAGCCAATAAGGATGAGATGTACAAGATTGTAGGGAACCTGGTGTACTACCGCTACATGAACCCAGCAGTGGTGGCTCCGGATGGGTTTGATGTGGTGGAGTTTGGAGCGGGTTCTGCTCTGCTGCCAGAACAGAGGAGAATCCTTGGCTCCATTGCCCGAATTCTGCAGCACAGTGCAGCACACAAACACTTCCATGGTGATTCCGCACACCTGCGTGCTCTCAATGACTACATCACACATACCCACGGCAAGTTCAGGAAGTTTCTGCAAGCTGTGTGTGATGTTCCTGAGCCTGAGGAACGCTTTAACATTGATGAGTACTCTGAGATGGTCATCCTCAACAAACCGGTCATCTATATTTCTATTGGCGAGCTCATCAACACTCACAAGcTGCTGCTGGAGCACCAGGACGCACTGTGTCCTGAACAGAATGACCCTCTCCTCTTGCTGCTGAGGGACCTGGGCAAGGTGCCCTCTGTCCAAGCTCTTGTCGGAGAGGGAGTGATCAACTCTGGAGATCCAAACCTGGAGCAGACTTTGGCTCAGTACAACAAGATGGAAGTGTCTCTGACACTCACCAGCAAGTTTGATGTCTTCAGAAGCTCTGACGACAAACCTGATGCCCGAGGCATCCTGCTCAGCACCAAGCAGCTGATAATCGATGTGATCAGAGCTCAGCCTGGAGACACACTGAGTGAAGTTCTGAGATCCTCTGTTTCTCAGGATCAGGAGGTGCAGCATGGCTGGATGATGCACCGCAGGGCACAGCGGGACGCCCGTACCCCAGAAAAAATGAAGAGGAACCAGTCTCTGATCGCTGACAGTAACTTATCGCTGGAGGAGAAAAAGCGTAAGATTCAGCGCAGCCTGAGGAGGCTGGAGGCTCTGGGAGTGCTCACCCCTCCAGACTCTGAGACTCAGATTCTGCAGCTCATTGCCAAGGATATCCGTCACCAGCGTCTTTACCGGCAGAGACGTCAGGCTGAGCTAGTGAAGCTCAAACATGCGCTGCACAGCCTGCACTGCAAGAGCTCCTTCCAATCTGAGCAGGTTGACTACTACAGCCAATACATCGCAACCTGTCTGCGCAACCTTACTGCcagTCAAGTAAATGGGAAAAAGGCAGCAGACAGTAAAGGGAAGAAGAGCAAACAGCCTGCGCTCTCCTACACCGCCGCTCGCCTCTACGAGAAGGGAGTCCTACTGGAGATTGAGGACCTACCCAATACACAGTTTAAGAATGTGATCTTTGACATCATACCCAGTGAGGAGGGAGGCACCTTTCTGGTTAAGGCACGATTTTTGGGAGTGGACATGGAGCGTTTCCCCCTGAAATATCAGgATTTGCTGCAGCTCCAGTATGAAGGTGTTGCTGTGATGAAGATGTTTGATAAAGCCAAAGTGAACGTCAATCTCCTCATCTTTCTCCTCAACAAGAAATTTTTCAAAAAGTGAACAGTCGGGGCATctaactctaaacacacacttacatatttGTTGGGTATTGCacttttctaaaagaaaaaaataagggaaattatTTTTTGAGTACAAACCTTAACcggtttatttatattatatgcaaTGGAATCACATGATTTAAGTTCTTATAAGCAGATGTCAGTGGGCTTGTATAATCGTATCAttgtatcatttaaaaatacatactcTTACAGTCTTACACTACTTTTCAGCTGCCTTGTTGGATTGAGTTTATCTTGGGCATTGATCCaacaattttattatattactgaTAAATAAGATCTAACAGCAGCTTgccagttatatatatatatatattttatacaatccAATGATTGATTTCTTATATTCGTATGTAGATCTCTGTAACACTACCTAAAAATCAAAATCCATCTTTATATCAGTCAAGCCTGTAGGTAACTAATAACAGGCAGTATACTGTATCAAAAGGACaatcttcttcttttatttgtGGTTTTCCTGGACTACCAGACTATTTTATATTAcactattttattgtgtttgtatactttatgtactgtattattGTTTAACATTAACATCACTCCATATACCTTTCTTGGGCCTGGTTGCCTTTAGTGCATTCTTATTTGTCAGCACTTAAATGGAACACTCCACAGGGTCTATAGAAAAATACTGTTGTATTTTTCCTCCACTTAGCAGAGCTGTTCTCCAAagctacacacactaaaacacacacactccagcagcGCTATGGTGGTCTCTGCTTGTCCAACCAGCACAGAAATGTACTGTCTGTCCATAATGACTCAGATGTTGATGTATGATGGGCAGCTTGACTCCCACGCTTAACTGCTTAAGTGTGAGGTTTTCACAGCGCTAGTTGCATGGCTGGTCAGCAATTATGTGTAGCTCCATTTCAGCTTGATGTGAAGTTGTGTGGTAGTGCTGCGTATGACTGGATGTTAAGCGTTTATTGAACCTAGTGTcattctgtgtttgtttataagGCCCATTACAAGTGTTTTCATATTTATGTGATATGGCTGTCAGATTGACACTTACTATCTTTGTAAATATTTTCTGTCTGCTTTTTCcctttcaacatttttttctctttgataTTTGACTTTTTCAGTCAGTCCATATTActttgttatattttatgttttactgcatgtgcgactctaaatgactaaaatattttaaaataaagtggcTTTCCAGTTA

Function

symbol description
iqgap3 Acts upstream of or within cell motility and convergent extension involved in gastrulation. Is expressed in digestive system; pectoral fin bud; pharyngeal arch; sensory system; and ventricular zone. Orthologous to human IQGAP3 (IQ motif containing GTPase activating protein 3).

NR:

description
PREDICTED: ras GTPase-activating-like protein IQGAP3

GO:

id name namespace
GO:0005622 intracellular anatomical structure cellular_component

KEGG:

id description
K05767 IQGAP2_3; Ras GTPase-activating-like protein IQGAP2/3

RNA

RNA id representative length rna type GC content exon number start site end site
TU121796 False 520 lncRNA 0.44 2 12741634 12743217
TU121797 False 466 lncRNA 0.42 2 12741634 12743163
XM_007237738.3 True 6533 mRNA 0.48 38 12720969 12743175

Neighbor

gene id symbol gene type direction distance location
LOC103037451 gatad2b,LOC108436554,LOC108270204 coding downstream 2963 12675171 ~ 12718006 (-)
polr3gl polr3gl,LOC107714326,LOC107666760,LOC107592290 coding downstream 87363 12623845 ~ 12633606 (-)
muc1 NA coding downstream 194012 12517205 ~ 12526957 (-)
dcst2 NA coding downstream 309146 12394273 ~ 12411823 (-)
LOC103036879 NA coding downstream 336082 12365737 ~ 12384887 (-)
LOC103038418 LOC108436530,LOC108262988,LOC106580249,LOC107567515,LOC105908886 coding upstream 61453 12804670 ~ 12831851 (-)
dennd4b dennd4b,LOC106605454,LOC106580258 coding upstream 98694 12841911 ~ 12891916 (-)
LOC103023525 crtc2,LOC108436548,LOC106580288,LOC106605456 coding upstream 159060 12902277 ~ 12926324 (-)
gsdme NA coding upstream 256120 12999337 ~ 13016408 (-)
c10h7orf31 NA coding upstream 401848 13145065 ~ 13159169 (-)
G90438 NA non-coding downstream 82645 12638089 ~ 12638324 (-)
G90429 NA non-coding downstream 117854 12601507 ~ 12603115 (-)
LOC111193333 NA non-coding downstream 133421 12585443 ~ 12587548 (-)
G90405 NA non-coding downstream 206295 12512003 ~ 12514674 (-)
G90365 NA non-coding downstream 235626 12484007 ~ 12485343 (-)
G90547 NA non-coding upstream 49226 12792443 ~ 12792955 (-)
G90545 NA non-coding upstream 129804 12873021 ~ 12899679 (-)
G90567 NA non-coding upstream 196959 12940176 ~ 12944190 (-)
G90570 mpp6,LOC108267518,LOC107550794,LOC107749029,LOC107685533 non-coding upstream 229077 12972294 ~ 12981286 (-)
G90580 NA non-coding upstream 394674 13137891 ~ 13138334 (-)
LOC103024123 LOC108436541 other downstream 551275 12162288 ~ 12169694 (-)
LOC103031398 dgat1b,LOC108436588,LOC108267870,LOC107741726,LOC107552801,LOC107671724,LOC107724797 other downstream 1090968 11608471 ~ 11630001 (-)
LOC103045558 ensab,LOC103045558,LOC108441925,LOC108268136,LOC107741750,LOC107663348,LOC107587831,LOC107597988 other downstream 1977252 10732935 ~ 10743717 (-)
vps72 vps72,LOC107571619 other downstream 2025635 10682356 ~ 10695334 (-)
lysmd1 lysmd1 other downstream 2061363 10655471 ~ 10659606 (-)
G90571 mpp6,LOC108267518,LOC108436535,LOC107596657,LOC107749029 other upstream 207395 12950612 ~ 12967291 (-)
LOC103029309 osbpl3,osbpl3b,LOC108441521,LOC107678127,LOC107550826,LOC107685532 other upstream 278778 13021995 ~ 13135114 (-)
G90788 NA other upstream 1514738 14257955 ~ 14258956 (-)
LOC103022461 NA other upstream 2381296 15124513 ~ 15130106 (-)
G91187 NA other upstream 2580083 15323300 ~ 15324097 (-)

Expression


Co-expression Network