c10h7orf31


Basic Information

Item Value
gene id c10h7orf31
gene name NA
gene type coding
species mexican tetra (Astyanax mexicanus)
category of species ornamental fish

Chromosome Information

Item Value
chromosome id NC_035906.1
NCBI id CM008309.1
chromosome length 35377769
location 13145065 ~ 13159169 (-)
genome version Astyanax_mexicanus-2.0_2017_mexican_tetra_Genome

Sequence

>XM_015601317.2
CGTCATGACCAGCCTGAGGTATCGGAGCCTGTGGGACCAGAGACAGAAAGGCAGTTTGTTCCAGGCTGACGTACACAAGAGTTCTCACATGTTTTAATTCACCTGAGCTTGGACACCTACCCACCCCTGCCCTGATACCTGCCCCAGGACACAGGGTCAGAGACCTGGCCTGGAAGATCTCGACTCACTGGACTCCCTGCTTCACTGAAACTGGAGACTCCAGCTTGACctcaagagaaaaaaacagccaagGAGTCTACCAAGaaccTGCTTAAGAGGTCTTCAGAGAAACCACAATAACAGCAGCAGAAGGAAGATGGCATCAAACGTTCATAGAGGAGGAATACCTGCAGTTATTAAAGGCCATCGACACTTCAGCTATGGAGGGTCTGTTTTACCTGAGTCTGTCTCCATTGCACAGTACTATGACATAACCCCAACCAAGAGAAGTAACGTTCGCACCAATGATGAGCTgaTTCCCAGGCCAACCAATATCAACCTTGGTGAAAAGACTATTAAAGTCTCCATCCAGAGGGAGCACCCATACCAGTCCCACATCTCCCGCTGTGCCATGTTCCCTAACTACCGGAGCCCTGACGATCCAAACACAGGTGTAAGAGCCAGCAACAAACTCCCTCTCAACCCCCTCCTCCCAGCCAGCGCTCCACAGGTCACTGTACTCAGTAAAACCAAAGGTGGACCTTACCGTCATGAACTTCTGGATGTTCCAATGGAAACCAGGAGGACTGGAACAGTTTGGCCCGGGCAAAACGGTTTCAAGAATCACATCAAACCAGCGAAAGgacagatgcaggagttttaccCCAAAACTCCAAAGACACTGTGCCCTAATCTGACTCTGAGAGACTGGAAGACCACGCTGTCCGAACGCACGGCCAACATGCTGCGAAACGTGGAGAAATCACAGTGGCTCACTTCATACCAGTTACACTTTACAGGCACTGGGCCCACAAACCCGATAAAACTGGATGACTTCAATGAGAAGACAATCAGCTCGATTACAGGAGAAACGGATCCTTATACAGCACAGCTGAAGGAGAGATCTTGCCCAACGTTCCTCCCTCCTCGACCACTGGAGGGACGCAAGGCCAGGATTCTGCAGGACAGGCGTCCTCTGGAAGGAAGATATCCTTCATCCTCACCGTCCTCTGCAGCTGGAAAGACCCCTATTCAGGATGACACATCTAGGAAGTGGTCTGTAGGTCTACCACAAAATGCAAACGTTGAGCATGAGGTACACAGGGCCATTAAAGCCAATGAATCAATTCACCCAATATATAGTTCTGAATTTTACAGTGAATCATATGTGTGTGATCGTTGCTGGGAGAGAAACTGTATGTGTACGGTTAGGCTTTCAGAGCCAAATAGTGATACTAACGCAGGATCATTTCTCCCACAAAACACCTTTCAACCTGCACTGCAAGAGAAGAACAGCAAAGAAGGGCTAAGGGGACTGTTTCGCAAAGTCCAGAAGTATATGGGCAAGAAGAACCCATTTGAGCTCAGCCAGCTTCCACAGTCTGATGAAGATGCTACTGATAGATATATAAGATTAGGTAGACCAACAAATCATTGGTTTAAATCAGAGTCAGAGAAGGaagaagagagagtgaaggtGGTTTCTCGCACTTCTGTCAGCATCCAGCCCCGCTCCTCCAGTGCCCCCTATAGCTACGGAGAAAGGCCAAACAGCAGGACGGATGATAACGGACCCTTCCGCTCTCAGTCTGTGCTGCTGGATCTTCAGGATTCTTTCAGCCAGACTGAGGCCCACCGTCGCTTTCATGAGACCCTGCAGGGTGCCAGTATGGACCTACGGGACAACCATCACACTGGAAGAAAACACTGCTTCTATGGCTTCAACTCCTACTACTACCATAACTGAAAAAAGTAGACATGACATGAACCTAAGATACATAATTAATGGAaacctatttattatataattttattacctGAATTTACATTCATTGATACCAATGATGCTAATTTAACCAGTGTTACAGCCGTTTACAGAGTTTGTCATTTGCTCAGATCCAAATTAGTTTGTAAACTTGTACAGCCATTTTCTTCaggttggtttgttttcacacaggggaAATCTTTGTGtcacaacaaaccatgtgagaaCATTTTCTCTATGCCAAGCCTTTTAAGCCTAAAACCACCAATCTTCCAAATCATAACTCGATTTTTACCAGTTAAAGCTCAAACTACAGATCTCTGTGTTGTAGTTTTCCGTATCTAATTTCAGCTCATATCAGCTATGAAATGTTTACTAGTAATAATATCTCTATAAATCTAAAGATTTGTAAAATCATTCTGACTAAATACTTTAGCAGGAGTACATATCCTTTAAGATATTTTACATTACCATTGATTTAGATGGAATTTTACACTCTCTTATCTATAATTATGTTTTAACCAGTAAAAACTCCAGTAACGGGTAGctatagttatttttttaccagTATGAGTTATGAATAATTCTGTCTATTAAAAAGTCCAGTTT

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
XM_015601317.2 True 2533 mRNA 0.45 9 13145065 13159169

Neighbor

gene id symbol gene type direction distance location
gsdme NA coding downstream 128657 12999337 ~ 13016408 (-)
LOC103023525 crtc2,LOC108436548,LOC106580288,LOC106605456 coding downstream 218741 12902277 ~ 12926324 (-)
dennd4b dennd4b,LOC106605454,LOC106580258 coding downstream 253149 12841911 ~ 12891916 (-)
LOC103038418 LOC108436530,LOC108262988,LOC106580249,LOC107567515,LOC105908886 coding downstream 313214 12804670 ~ 12831851 (-)
LOC103037451 gatad2b,LOC108436554,LOC108270204 coding downstream 427059 12675171 ~ 12718006 (-)
LOC111193301 NA coding upstream 98531 13257700 ~ 13259044 (-)
LOC103047375 grik2,LOC108271497 coding upstream 375439 13534608 ~ 13780573 (-)
LOC103042169 ptchd3a,LOC108428942,LOC107712800,LOC107599657,LOC107732096,LOC107677105 coding upstream 987700 14146869 ~ 14151372 (-)
LOC103045045 LOC108428908 coding upstream 995032 14154201 ~ 14163418 (-)
LOC103044740 NA coding upstream 1009383 14168552 ~ 14173068 (-)
G90580 NA non-coding downstream 6731 13137891 ~ 13138334 (-)
G90570 mpp6,LOC108267518,LOC107550794,LOC107749029,LOC107685533 non-coding downstream 163779 12972294 ~ 12981286 (-)
G90567 NA non-coding downstream 200875 12940176 ~ 12944190 (-)
G90545 NA non-coding downstream 245386 12873021 ~ 12899679 (-)
G90547 NA non-coding downstream 352110 12792443 ~ 12792955 (-)
G90613 NA non-coding upstream 208080 13367249 ~ 13367763 (-)
G90621 NA non-coding upstream 273750 13432919 ~ 13433470 (-)
G90623 NA non-coding upstream 295019 13454188 ~ 13454482 (-)
G90629 NA non-coding upstream 324393 13483562 ~ 13483827 (-)
G90632 NA non-coding upstream 343123 13502292 ~ 13502777 (-)
LOC103029309 osbpl3,osbpl3b,LOC108441521,LOC107678127,LOC107550826,LOC107685532 other downstream 9951 13021995 ~ 13135114 (-)
G90571 mpp6,LOC108267518,LOC108436535,LOC107596657,LOC107749029 other downstream 177774 12950612 ~ 12967291 (-)
LOC103038102 iqgap3,LOC106605450,LOC105031059,LOC105908924 other downstream 401848 12720969 ~ 12743217 (-)
LOC103024123 LOC108436541 other downstream 975371 12162288 ~ 12169694 (-)
LOC103031398 dgat1b,LOC108436588,LOC108267870,LOC107741726,LOC107552801,LOC107671724,LOC107724797 other downstream 1515064 11608471 ~ 11630001 (-)
G90788 NA other upstream 1098786 14257955 ~ 14258956 (-)
LOC103022461 NA other upstream 1965344 15124513 ~ 15130106 (-)
G91187 NA other upstream 2164131 15323300 ~ 15324097 (-)
G91208 NA other upstream 2600792 15759961 ~ 15766432 (-)
pomgnt2 pomgnt2,LOC107657577,LOC107732433,LOC107551215,LOC107751881,LOC107704096,LOC107601673 other upstream 3015784 16174953 ~ 16191275 (-)

Expression


Co-expression Network