G90623


Basic Information

Item Value
gene id G90623
gene name NA
gene type non-coding
species mexican tetra (Astyanax mexicanus)
category of species ornamental fish

Chromosome Information

Item Value
chromosome id NC_035906.1
NCBI id CM008309.1
chromosome length 35377769
location 13454188 ~ 13454482 (-)
genome version Astyanax_mexicanus-2.0_2017_mexican_tetra_Genome

Sequence

>TU121914
ttctgctcggctcatactgctggagcacatcagataaatatgctggtcctgcaccattaacacatttatacaccagtaacagtaccttaaagtctattctgtaacatactggtatccagtgcagggatttaaggatgggggtgatgtgctcccttcttttactcctagtcaaaactctggctgctgaattctgaatcagctgaagctgtttgatggtcttttttgggagtccagttaggagtccattacagtaatcaatcctactagaaataaaggcgtGGATGAGTTTCTCCAG

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU121914 True 295 lncRNA 0.43 1 13454188 13454482

Neighbor

gene id symbol gene type direction distance location
LOC111193301 NA coding downstream 195144 13257700 ~ 13259044 (-)
c10h7orf31 NA coding downstream 295019 13145065 ~ 13159169 (-)
gsdme NA coding downstream 437780 12999337 ~ 13016408 (-)
LOC103023525 crtc2,LOC108436548,LOC106580288,LOC106605456 coding downstream 527864 12902277 ~ 12926324 (-)
dennd4b dennd4b,LOC106605454,LOC106580258 coding downstream 562272 12841911 ~ 12891916 (-)
LOC103047375 grik2,LOC108271497 coding upstream 80126 13534608 ~ 13780573 (-)
LOC103042169 ptchd3a,LOC108428942,LOC107712800,LOC107599657,LOC107732096,LOC107677105 coding upstream 692387 14146869 ~ 14151372 (-)
LOC103045045 LOC108428908 coding upstream 699719 14154201 ~ 14163418 (-)
LOC103044740 NA coding upstream 714070 14168552 ~ 14173068 (-)
LOC103044420 LOC103044420,LOC108428913,LOC108270740,LOC107712786,LOC107599658,LOC107677205,LOC107657757 coding upstream 720086 14174568 ~ 14180114 (-)
G90621 NA non-coding downstream 20718 13432919 ~ 13433470 (-)
G90613 NA non-coding downstream 86425 13367249 ~ 13367763 (-)
G90580 NA non-coding downstream 315854 13137891 ~ 13138334 (-)
G90570 mpp6,LOC108267518,LOC107550794,LOC107749029,LOC107685533 non-coding downstream 472902 12972294 ~ 12981286 (-)
G90567 NA non-coding downstream 509998 12940176 ~ 12944190 (-)
G90629 NA non-coding upstream 29080 13483562 ~ 13483827 (-)
G90632 NA non-coding upstream 47810 13502292 ~ 13502777 (-)
G90657 NA non-coding upstream 363572 13818054 ~ 13818570 (-)
LOC111193335 NA non-coding upstream 482676 13937158 ~ 13938382 (-)
LOC111193334 NA non-coding upstream 625357 14079839 ~ 14106543 (-)
LOC103029309 osbpl3,osbpl3b,LOC108441521,LOC107678127,LOC107550826,LOC107685532 other downstream 319074 13021995 ~ 13135114 (-)
G90571 mpp6,LOC108267518,LOC108436535,LOC107596657,LOC107749029 other downstream 486897 12950612 ~ 12967291 (-)
LOC103038102 iqgap3,LOC106605450,LOC105031059,LOC105908924 other downstream 710971 12720969 ~ 12743217 (-)
LOC103024123 LOC108436541 other downstream 1284494 12162288 ~ 12169694 (-)
LOC103031398 dgat1b,LOC108436588,LOC108267870,LOC107741726,LOC107552801,LOC107671724,LOC107724797 other downstream 1824187 11608471 ~ 11630001 (-)
G90788 NA other upstream 803473 14257955 ~ 14258956 (-)
LOC103022461 NA other upstream 1670031 15124513 ~ 15130106 (-)
G91187 NA other upstream 1868818 15323300 ~ 15324097 (-)
G91208 NA other upstream 2305479 15759961 ~ 15766432 (-)
pomgnt2 pomgnt2,LOC107657577,LOC107732433,LOC107551215,LOC107751881,LOC107704096,LOC107601673 other upstream 2720471 16174953 ~ 16191275 (-)

Expression


Co-expression Network