G91306


Basic Information

Item Value
gene id G91306
gene name NA
gene type non-coding
species mexican tetra (Astyanax mexicanus)
category of species ornamental fish

Chromosome Information

Item Value
chromosome id NC_035906.1
NCBI id CM008309.1
chromosome length 35377769
location 16369149 ~ 16369439 (+)
genome version Astyanax_mexicanus-2.0_2017_mexican_tetra_Genome

Sequence

>TU122790
TCACACCCTACCGCACTCAGCCGCAGAACACCACCACACCATCCCACACACACGTCTCTCCAAACTTATGCATGTATGTAACACtcaaataaatactaataaattgaaaataaataaaaatatggtcaaatgTAAGAAGAGTGTGCTGTTTAATTGACATGATGGTTAAAAGAAAGCTTGGACACTGACTTCTCTGTGAACTCCAGACTCCAGTATTGAATTGTTGACAAATATAATTTACTTGAAAGCAAAGGGGGacctatttaatataattttcatGTTATGGCTGTt

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU122790 True 291 lncRNA 0.36 1 16369149 16369439

Neighbor

gene id symbol gene type direction distance location
abhd5 abhd5,LOC107657580 coding upstream 64844 16294469 ~ 16304305 (+)
snrk snrk,snrka,LOC107551216,LOC107723077,LOC107657578,LOC107704097,LOC107751880 coding upstream 121403 16201385 ~ 16247746 (+)
fam198a NA coding upstream 210465 16122851 ~ 16158684 (+)
entpd3 entpd3 coding upstream 247458 16104783 ~ 16121691 (+)
palmd palmd coding upstream 294747 16029170 ~ 16074402 (+)
tcaim tcaim,LOC107751885,LOC107704100,LOC107601675 coding downstream 4273 16373712 ~ 16382389 (+)
LOC103035015 cck coding downstream 65901 16435340 ~ 16481411 (+)
ulk4 ulk4,LOC107668185,LOC107564876 coding downstream 189437 16558876 ~ 16680559 (+)
cmtm8 NA coding downstream 376133 16745572 ~ 16748700 (+)
LOC103040229 ptprub,LOC108441315,LOC107704844 coding downstream 459781 16829220 ~ 16941407 (+)
LOC107197645 NA non-coding upstream 62 16342546 ~ 16369087 (+)
G91309 NA non-coding upstream 5467 16363472 ~ 16363682 (+)
G91280 NA non-coding upstream 171012 16197806 ~ 16198137 (+)
G91147 NA non-coding upstream 269174 16094413 ~ 16099975 (+)
G91141 NA non-coding upstream 368767 15999970 ~ 16000382 (+)
G91312 NA non-coding downstream 13145 16382584 ~ 16383203 (+)
G91339 cnot10 non-coding downstream 63428 16432867 ~ 16435280 (+)
G91350 trak1 non-coding downstream 123556 16492995 ~ 16496357 (+)
G91366 ctnnb1 non-coding downstream 316099 16685538 ~ 16691936 (+)
LOC103037726 NA non-coding downstream 322590 16692029 ~ 16786630 (+)
LOC103025288 LOC107578870,LOC108428970,LOC106578494,LOC108273189 other upstream 1086094 15276142 ~ 15283055 (+)
alg14 alg14,LOC107739035 other upstream 1152641 15160215 ~ 15216508 (+)
LOC103045856 NA other upstream 1595782 14662657 ~ 14773367 (+)
LOC103029466 c1ql3,LOC103029466,LOC108428918,LOC107677106,LOC107599742,LOC107555006 other upstream 1716867 14645798 ~ 14652282 (+)
eif1b eif1b,zgc:56676,LOC107657782,LOC107599656,LOC105910901,LOC107712803,LOC105027100 other upstream 2094451 14271995 ~ 14274698 (+)
trim71 trim71,LOC107751884,LOC107657583,LOC107601676,LOC107723073,LOC107551222 other downstream 25775 16395214 ~ 16419380 (+)
rcc1 NA other downstream 989400 17358839 ~ 17447933 (+)
G91678 NA other downstream 1542462 17911901 ~ 17912443 (+)
G91728 NA other downstream 1978588 18348027 ~ 18361095 (+)
G91748 NA other downstream 2031049 18400488 ~ 18421263 (+)

Expression


Co-expression Network