G91853 (hint3)


Basic Information

Item Value
gene id G91853
gene name hint3
gene type non-coding
species mexican tetra (Astyanax mexicanus)
category of species ornamental fish

Chromosome Information

Item Value
chromosome id NC_035906.1
NCBI id CM008309.1
chromosome length 35377769
location 18810861 ~ 18813397 (+)
genome version Astyanax_mexicanus-2.0_2017_mexican_tetra_Genome

Sequence

>TU123531
GTGCAATCTTAattcaaaaaaattaatttagttcCTTGAGGAACATTGGAGGAACCCACTAACACATTTTGAAGAacctttaaaacatattttagaaGGAAAATGTTTCCTGAAGGTTCCTTGATGCTCTAACTTTCTTTATGGTTCCTTAATGCACCTTAATTGTTTCCTATACAGGTTTAAATTAAGGAACCTCAAAAAATTTCTCACAGATCATATCTACAAGCTCACCGTAATGAACCAGTAGGAGTCCGGGCGGAAGATCAAGCGAGCCATGAAGCCCATCTGACTGGCAGGTGCCAGCACATGAAGGTGCAGATGTACAACAGAGTGAAACGGAGGCCAGTGGAAGCCAAACCTGACATCATTTAAATCTGTGACATTGTTCTTCTGAAGAATAGTCTTTCCCGTTTCCATCAATTTCtccaCTAATGGAATATGTTCCTTGTTGAGCGATTTACAGTTCCCTACATGTTTTGTAGGAACAACAAGATAGTGATGGGGAGCTCCAGGTTTTATGTCTCTAAAACATGATATTTCTTCATCGCTGTGTAAGAGCTCAGTGTCCATCTCCCTGTTCACtattttacagaaaatacactttttatcGTAAGAGTCGCTAGGCTGTTGTTTATTATCAGGCTCGGCGGGCGCTGTGCTGTCGCTGCTGGCCATCTTCAAAGCTGTGTG

Function

symbol description
hint3 Predicted to enable catalytic activity. Orthologous to human HINT3 (histidine triad nucleotide binding protein 3).

NR:

description
PREDICTED: histidine triad nucleotide-binding protein 3

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU123531 True 690 lncRNA 0.41 4 18810861 18813397

Neighbor

gene id symbol gene type direction distance location
LOC107197682 abra coding upstream 2580 18801725 ~ 18808281 (+)
LOC103027397 wdr26,LOC103027397,LOC108434195,LOC108270098,LOC105017621 coding upstream 216075 18583015 ~ 18594786 (+)
adcy3 adcy3,adcy3a,LOC107703925,LOC107688975 coding upstream 229264 18553622 ~ 18581597 (+)
tgfb2 tgfb2,LOC106584161,LOC106605021 coding upstream 394136 18381696 ~ 18416725 (+)
rrp15 rrp15 coding upstream 436583 18368771 ~ 18374278 (+)
rbms3 rbms3,LOC108434201,LOC107668303,LOC107730162 coding downstream 62809 18876206 ~ 19150127 (+)
tgfbr2 tgfbr2,LOC107730143,LOC107600517,LOC107551196 coding downstream 383096 19196493 ~ 19232951 (+)
LOC103035958 stt3b,LOC108434203,LOC107668300,LOC107666808 coding downstream 440804 19254201 ~ 19320340 (+)
LOC103034694 gpd1l,LOC103034694,LOC108434205,LOC107551192,LOC107600618,LOC107713825,LOC107705153,LOC107666803 coding downstream 616261 19429658 ~ 19437684 (+)
tmem42 tmem42 coding downstream 628909 19442306 ~ 19444740 (+)
G91837 cenpw,LOC107668290,LOC107600551,LOC107666774 non-coding upstream 71485 18728707 ~ 18739376 (+)
G91836 NA non-coding upstream 83036 18727609 ~ 18727825 (+)
G91729 NA non-coding upstream 456313 18351934 ~ 18354548 (+)
G91723 NA non-coding upstream 485138 18325460 ~ 18325723 (+)
G91721 NA non-coding upstream 534464 18276156 ~ 18276397 (+)
G91867 NA non-coding downstream 20051 18833448 ~ 18834103 (+)
G91881 NA non-coding downstream 195066 19008463 ~ 19009460 (+)
G91884 NA non-coding downstream 259280 19072677 ~ 19141957 (+)
LOC111193344 NA non-coding downstream 448704 19262101 ~ 19267604 (+)
G91906 NA non-coding downstream 510299 19323696 ~ 19341265 (+)
LOC103028566 fez2 other upstream 197144 18604038 ~ 18613717 (+)
lyplal1 lyplal1 other upstream 303826 18494359 ~ 18507035 (+)
G91760 NA other upstream 318789 18491680 ~ 18492072 (+)
G91748 NA other upstream 389598 18400488 ~ 18421263 (+)
G91728 NA other upstream 449766 18348027 ~ 18361095 (+)
LOC103022253 lin28b,lin28a,LOC107744602,LOC107703899,LOC107732726,LOC107689005 other downstream 918415 19731812 ~ 19755475 (+)
LOC103028233 maneal,LOC102777073 other downstream 1230305 20043702 ~ 20057320 (+)
grik3 grik3,LOC100334689,LOC105019312,LOC106605119 other downstream 1544152 20357549 ~ 20612284 (+)
LOC103032252 LOC103032252,LOC108433590,LOC107755659,LOC107588526,LOC107700712,LOC107704880,LOC107705924 other downstream 2005530 20818927 ~ 20821390 (+)
stk40 stk40,LOC107755633,LOC107704982,LOC107588492 other downstream 2026578 20839975 ~ 20860936 (+)

Expression


Co-expression Network