G93079


Basic Information

Item Value
gene id G93079
gene name NA
gene type unknown
species mexican tetra (Astyanax mexicanus)
category of species ornamental fish

Chromosome Information

Item Value
chromosome id NC_035906.1
NCBI id CM008309.1
chromosome length 35377769
location 24698133 ~ 24708374 (+)
genome version Astyanax_mexicanus-2.0_2017_mexican_tetra_Genome

Sequence

>TU125154
GTGTCCAGCTGTCTTTTCtatgctgtggtgtgctggggaggaagCATGAAGAAGAGGGACGAGATGCgtctggacaagctggtcaggcgGGCGGGGTCCGTGGTTGGTGTGGAGCTAGACTCTGTGGTAACGGTGGCAGAGAGGAGGACACTGCAAAAACTACTCTCCATCATGGATGATGATGGTCACCCACTGCATTTCATCATCATGGATCAGaggagcagtttcagtggcaggctcttgtcacagagctgctctacggacagactgagaagatcgttcgttccgagagccatcagactcttcaactcctcccagtggagcCGGAAGAGAGAAGACAGATGAGGAACGAGTCTTAATATGTGCTTTCTTAATCAGCCttttttatctgtactggaaagcaccctacacatctacaccctgggactcttttgcctttttactgtatatactgttcatttgcATCCCTGGACACTtggcactttactgtacactctgtaccttttcactcctggacactttactgtacatcctgtacttttgcactcctggacactacactacgcaccttacttaaatacaatacttgcacaggtttatgtttaatattgtcatatctgctgataccttctatacttaaattattattttactgcactacctcatatctatgactgattactttcacactttgtatagtttttttgtatttatatatttatgtatatatttttaagtctcagtttataattttataTTTTTATAGT

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU125154 True 767 TUCP 0.42 2 24698133 24708374

Neighbor

gene id symbol gene type direction distance location
tpbg NA coding upstream 256994 24438000 ~ 24441139 (+)
bckdhb bckdhb,LOC102789113 coding upstream 387580 24250254 ~ 24310553 (+)
ttk ttk,LOC107569443,LOC107559022,LOC105908890,LOC105419921 coding upstream 449732 24237124 ~ 24248401 (+)
dctn3 dctn3,LOC107726235,LOC107689028,LOC107569444,LOC107713912,LOC107559051 coding upstream 463984 24229854 ~ 24234149 (+)
dcdc2 dcdc2 coding upstream 1578035 23085571 ~ 23120098 (+)
LOC103043665 NA coding downstream 123172 24831546 ~ 24837635 (+)
LOC103044355 NA coding downstream 140623 24848997 ~ 24861508 (+)
LOC103044674 LOC108443657 coding downstream 153711 24862085 ~ 24878057 (+)
LOC103046305 NA coding downstream 181580 24889954 ~ 24894549 (+)
LOC103046000 LOC108443660,LOC108263648,LOC107587789 coding downstream 186409 24894783 ~ 24906329 (+)
LOC111193352 NA non-coding upstream 160593 24510155 ~ 24537540 (+)
G93034 NA non-coding upstream 214821 24482967 ~ 24483312 (+)
LOC111193351 NA non-coding upstream 250782 24432897 ~ 24447351 (+)
G92977 NA non-coding upstream 287203 24374667 ~ 24410930 (+)
G92973 NA non-coding upstream 375259 24322660 ~ 24322874 (+)
G93087 NA non-coding downstream 59761 24768135 ~ 24769835 (+)
G93089 NA non-coding downstream 71191 24779565 ~ 24779817 (+)
G93102 NA non-coding downstream 98540 24806914 ~ 24807330 (+)
G93114 NA non-coding downstream 130844 24839218 ~ 24839748 (+)
G93117 NA non-coding downstream 134473 24842847 ~ 24843050 (+)
G92462 ptprub,LOC107705793,LOC107588504 other upstream 3346130 21269165 ~ 21352003 (+)
G92350 sh3d21 other upstream 3752627 20941426 ~ 20945506 (+)
stk40 stk40,LOC107755633,LOC107704982,LOC107588492 other upstream 3837197 20839975 ~ 20860936 (+)
LOC103032252 LOC103032252,LOC108433590,LOC107755659,LOC107588526,LOC107700712,LOC107704880,LOC107705924 other upstream 3876743 20818927 ~ 20821390 (+)
grik3 grik3,LOC100334689,LOC105019312,LOC106605119 other upstream 4085849 20357549 ~ 20612284 (+)
G93135 NA other downstream 206315 24914689 ~ 24965444 (+)
G93185 LOC105900568,LOC101883708 other downstream 603503 25311877 ~ 25313707 (+)
LOC103034726 LOC108436089 other downstream 1559119 26267493 ~ 26392435 (+)
G93753 NA other downstream 2240089 26948463 ~ 26948879 (+)
LOC111193309 l3mbtl4,LOC108432753,LOC107698702,LOC107570871,LOC107728988,LOC107653885,LOC106590345 other downstream 3210718 27919092 ~ 27939933 (+)

Expression


Co-expression Network