G93185 (LOC105900568,LOC101883708)


Basic Information

Item Value
gene id G93185
gene name LOC105900568,LOC101883708
gene type unknown
species mexican tetra (Astyanax mexicanus)
category of species ornamental fish

Chromosome Information

Item Value
chromosome id NC_035906.1
NCBI id CM008309.1
chromosome length 35377769
location 25311877 ~ 25313707 (+)
genome version Astyanax_mexicanus-2.0_2017_mexican_tetra_Genome

Sequence

>TU125312
CATGCCTAGTATAAATACCCTGTGCTGTGCTGCCTGTATTCACCCTCAGCACACATCAGAAGTTTAAAGCTTCTCTACAGGATCAGCCATGATGAGCCTTAAGATTGTTCTCTGTCTGGCTGTGTTGGCTACAGGGCTGCTGCTTACTGAATGCTCCTGGGGCAATGGACAAACTTCTTATAATTATGACCTATCCAAGATGTCTGACCTACGGAAACTGTACAACTCTAAGGTATATGTGGCTGACCGAATGACCAGACCTCTGGAAGGCATGTCTTTCCAAGCAGGCAAGATCAGTCACTCTGGAAGTGACGCTGGAAGATGGCACCAAGTGGCTGGTGCACAAAGGAAATGGCTATGGTATCTCATCCCAGACGGTGGTTGTGCATGCTCGTCACATGGGCTCCAACTGGAAGATCATTGAGACCAAAAACTTTGGTGGGAGTAAGACAGTGTCCGACTTTGTGAAAGCTGGAGGAACGGACTACAGTCTCATCTTCGATAACTGCCATGATGCCTCAGGAAGAATGATGGATGGCTAAGATTCGGACCTTTATGCTGAAATTTTTgttgcactttctgctgttgcTTTATCGTTGTactaatctttattttattttaatccattgAGCACAAAAGAATCAACATTCCAAAAACAATGAAACACATGCATGCAATATGAAATAAAAGACTGGTCTGTTTGGAcagtgtatatctgtatatggtgtgaatgtattaaaaatgtaatacatcTTATTAGCATTTGCGCAGTCAATAAACAACATGACATGA

Function

NR:

description
PREDICTED: uncharacterized protein LOC105900568

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU125312 True 792 TUCP 0.43 4 25311877 25313707

Neighbor

gene id symbol gene type direction distance location
LOC103025221 NA coding upstream 660 25293503 ~ 25311217 (+)
LOC103038714 NA coding upstream 19568 25282817 ~ 25292309 (+)
LOC111193304 NA coding upstream 32908 25272986 ~ 25278969 (+)
LOC103038083 NA coding upstream 43138 25243231 ~ 25268739 (+)
LOC103027368 NA coding upstream 69350 25210240 ~ 25242527 (+)
LOC111193354 NA coding downstream 3097 25316804 ~ 25327096 (+)
LOC103039026 NA coding downstream 21720 25335427 ~ 25345095 (+)
LOC111193305 NA coding downstream 38591 25352298 ~ 25353932 (+)
LOC103039346 LOC108436103,LOC107589405,LOC107724099 coding downstream 42775 25356482 ~ 25373171 (+)
LOC103026950 NA coding downstream 64663 25378370 ~ 25384965 (+)
G93172 NA non-coding upstream 34158 25261138 ~ 25277719 (+)
G93180 NA non-coding upstream 105019 25206570 ~ 25206858 (+)
G93151 NA non-coding upstream 178591 25132031 ~ 25133286 (+)
G93146 mlf2,LOC106605851 non-coding upstream 256215 25046996 ~ 25055662 (+)
G93138 NA non-coding upstream 370268 24941218 ~ 24941609 (+)
G93354 NA non-coding downstream 20497 25334204 ~ 25334733 (+)
G93389 NA non-coding downstream 273487 25587194 ~ 25588046 (+)
G93387 NA non-coding downstream 274394 25588101 ~ 25589489 (+)
G93386 NA non-coding downstream 328363 25642070 ~ 25646500 (+)
G93388 NA non-coding downstream 334067 25647774 ~ 25653617 (+)
G93135 NA other upstream 346433 24914689 ~ 24965444 (+)
G93079 NA other upstream 603503 24698133 ~ 24708374 (+)
G92462 ptprub,LOC107705793,LOC107588504 other upstream 3959874 21269165 ~ 21352003 (+)
G92350 sh3d21 other upstream 4366371 20941426 ~ 20945506 (+)
stk40 stk40,LOC107755633,LOC107704982,LOC107588492 other upstream 4450941 20839975 ~ 20860936 (+)
LOC103034726 LOC108436089 other downstream 953786 26267493 ~ 26392435 (+)
G93753 NA other downstream 1634756 26948463 ~ 26948879 (+)
LOC111193309 l3mbtl4,LOC108432753,LOC107698702,LOC107570871,LOC107728988,LOC107653885,LOC106590345 other downstream 2605385 27919092 ~ 27939933 (+)
LOC103021747 rheb,LOC107653878,LOC106590380 other downstream 3895571 29209278 ~ 29326025 (+)
LOC103044382 NA other downstream 3937326 29251033 ~ 29346842 (+)

Expression


Co-expression Network