G45249


Basic Information

Item Value
gene id G45249
gene name NA
gene type non-coding
species grasscarp (Ctenopharyngodon idella)
category of species economic fish

Chromosome Information

Item Value
chromosome id CI01000006
NCBI id null
chromosome length 13024002
location 7831162 ~ 7831407 (+)
genome version v1_2015/06_NatureGenetics_grasscarp_Genome

Sequence

>TU51425
CAGTTGTATTTTTTTCAAAAATGACCGATCGTTTCGCTAGATAAGACCCTTATTCCTCGTCTGGTATCGTTTAAAGCCCTTTGAAGCTGCACTGAAACTGTAATTTTGACCTTCAACCGTTTGGAGGCCATTGAAGTCCACTATAAGGAGAATAATCCTGGAATGTTTTCATCAAAAACCTTAATTTCTTTTCGACTGAAGAAAGAAAGACATGAACATCTTGGATGACATGGGGGTGAGTAAATT

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU51425 True 246 lncRNA 0.38 1 7831162 7831407

Neighbor

gene id symbol gene type direction distance location
CI01000006_07757777_07795187 NNT.L, NNT coding upstream 35904 7757526 ~ 7795258 (+)
CI01000006_07699736_07726659 MFHAS1 coding upstream 104165 7699736 ~ 7726997 (+)
CI01000006_07694812_07698078 ERI1 coding upstream 132728 7694812 ~ 7698434 (+)
CI01000006_07692311_07693192 PPP1R3B coding upstream 137045 7692240 ~ 7694117 (+)
CI01000006_07577082_07582303 DUSP4 coding upstream 248849 7576398 ~ 7582313 (+)
CI01000006_07939608_07940846 RXFP3 coding downstream 107911 7939318 ~ 7941415 (+)
CI01000006_08025159_08032131 NA coding downstream 193752 8025159 ~ 8032623 (+)
CI01000006_08108713_08122179 NA coding downstream 277156 8108563 ~ 8122364 (+)
CI01000006_08184916_08188512 NEFMA coding downstream 353392 8184799 ~ 8189299 (+)
CI01000006_08198328_08199463 NA coding downstream 366790 8197881 ~ 8200145 (+)
G45244 NA non-coding upstream 11428 7819113 ~ 7819734 (+)
G45201 NA non-coding upstream 82203 7734809 ~ 7748959 (+)
G45233 NA non-coding upstream 144986 7685958 ~ 7686176 (+)
G45178 NA non-coding upstream 147491 7607604 ~ 7683671 (+)
G45219 NA non-coding upstream 165406 7664893 ~ 7665756 (+)
G45265 NA non-coding downstream 54245 7883867 ~ 7920355 (+)
G45297 NA non-coding downstream 114850 7946257 ~ 7946975 (+)
G45303 NA non-coding downstream 123639 7955046 ~ 7955249 (+)
G45308 NA non-coding downstream 139625 7971032 ~ 7971805 (+)
G45322 NA non-coding downstream 161226 7992633 ~ 7992865 (+)
G44872 NA other upstream 443278 7356352 ~ 7387884 (+)
CI01000006_07167131_07168925 NA other upstream 660628 7166778 ~ 7168925 (+)
CI01000006_06122278_06122736 NA other upstream 1702487 6122035 ~ 6122751 (+)
CI01000006_06104927_06109730 NA other upstream 1721574 6104927 ~ 6109820 (+)
G45336 NA other downstream 187935 8019342 ~ 8021951 (+)
G45355 NA other downstream 378148 8209555 ~ 8212388 (+)
G45416 NA other downstream 987407 8818814 ~ 8834697 (+)

Expression


Co-expression Network