CI01000006_07167131_07168925


Basic Information

Item Value
gene id CI01000006_07167131_07168925
gene name NA
gene type misc
species grasscarp (Ctenopharyngodon idella)
category of species economic fish

Chromosome Information

Item Value
chromosome id CI01000006
NCBI id null
chromosome length 13024002
location 7166778 ~ 7168925 (+)
genome version v1_2015/06_NatureGenetics_grasscarp_Genome

Sequence

>CI01000006_07167131_07168925.mRNA
TTTTAAATAGCCCTTTCCTGCTCATGTTTTGTTGAGTGCGTGGTGTGTGCATGAGGGAGTGAGAGAGAAAACGTGGTCGCGGAGAAGCCTAGCATTTAGCTAGTTTGCGTGTGAGTGTGTGAATGAAGTGTTATACAGGCTCAGATATTTAGTATTATTTATTTTTGTATGTAGTCAAGTTTGCCACAAACGGACAAGGTAAATAATTGGAGAAAATAACTTGATATTGAACTGCTGCTGACATGTACATTTTCCCAGTCGTGCTAAATTGTTTTTTTCTTTTGCTTCAAGGTGCAAAGACACTATTTGATTAAGGCAGCTGGCTGAGTTTGTGGTTGCAACAGTGTTGAAAAATGTCCATGGGCAGTCAGAAGACCACCAGTCAGGCAATTCCGACCACCAGACGAATCACAATCAACGATGCGGCCCATATGCCTCATGATTACTCTACAACGCCCGGAGGGACCCTTTTTAGCACGACTCCTGGAGGTGTTTCTGGCTGCAGCTATAATGCACTCTTTAGCTTTACCTCACTGAGTGAATGTAGTTCAAGGATGTTTGTGTGTGAAGATGTATTTGATGTGATTACTAAATTATATATAGGCACCCGGATCATCTATGACCGAAAGTTCCTGCTGGACTGTCGCAGCTCCCCGTTGGCACGCACACCACCCTGCTGCCTCCCTGACATTCCGGGGGTGACCAGTCCTCCTTCAGTCACCATGAATAATGACAAGGCCCACCCCAAACAGACTGTCAATAATAACCGCATCAGCCCCCCAGCGGACAAGAGCGCAG

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
CI01000006_07167131_07168925.mRNA False 798 mRNA 0.46 3 7166778 7168925

Neighbor

gene id symbol gene type direction distance location
CI01000006_07121418_07160572 ANK1 coding upstream 5953 7121169 ~ 7160825 (+)
CI01000006_07078406_07080719 NA coding upstream 85848 7076952 ~ 7080930 (+)
CI01000006_07072315_07073358 NA coding upstream 93367 7071668 ~ 7073411 (+)
CI01000006_07066344_07070484 FTSJ1 coding upstream 95523 7066344 ~ 7071255 (+)
CI01000006_06987083_06990215 NA coding upstream 176420 6987083 ~ 6990358 (+)
CI01000006_07194003_07196123 NA coding downstream 24797 7193722 ~ 7196355 (+)
CI01000006_07203185_07207649 NA coding downstream 34260 7203185 ~ 7207660 (+)
CI01000006_07208843_07212249 RGS7BPB coding downstream 39555 7208480 ~ 7212838 (+)
CI01000006_07214841_07222648 C6 coding downstream 45916 7214841 ~ 7222817 (+)
CI01000006_07243073_07247934 GHR coding downstream 74148 7243073 ~ 7248022 (+)
G44794 NA non-coding upstream 2071 7162480 ~ 7164707 (+)
G44818 NA non-coding upstream 102611 7063827 ~ 7064167 (+)
G44817 NA non-coding upstream 102994 7063521 ~ 7063784 (+)
G44780 NA non-coding upstream 171401 6992868 ~ 6995377 (+)
G44747 NA non-coding upstream 189894 6976398 ~ 6976884 (+)
G44821 NA non-coding downstream 4292 7173217 ~ 7173447 (+)
G44793 NA non-coding downstream 53997 7222922 ~ 7312257 (+)
G44851 NA non-coding downstream 145900 7314825 ~ 7315134 (+)
G44852 NA non-coding downstream 146286 7315211 ~ 7315553 (+)
G44853 NA non-coding downstream 146796 7315721 ~ 7315980 (+)
CI01000006_06122278_06122736 NA other upstream 1038103 6122035 ~ 6122751 (+)
CI01000006_06104927_06109730 NA other upstream 1057190 6104927 ~ 6109820 (+)
G43896 NA other upstream 1395003 5770089 ~ 5771775 (+)
G41996 NA other upstream 2042629 5117206 ~ 5124149 (+)
CI01000006_03734862_03735227 BANF1, BANF1.S, BANF1.L other upstream 3430800 3734554 ~ 3736035 (+)
G44872 NA other downstream 187427 7356352 ~ 7387884 (+)
G45178 NA other downstream 453066 7607604 ~ 7683671 (+)
G45265 NA other downstream 714942 7883867 ~ 7920355 (+)
G45336 NA other downstream 850417 8019342 ~ 8021951 (+)
CI01000006_08198328_08199463 NA other downstream 990591 8197881 ~ 8200145 (+)

Expression


Co-expression Network