CI01000006_07208843_07212249 (RGS7BPB)


Basic Information

Item Value
gene id CI01000006_07208843_07212249
gene name RGS7BPB
gene type coding
species grasscarp (Ctenopharyngodon idella)
category of species economic fish

Chromosome Information

Item Value
chromosome id CI01000006
NCBI id null
chromosome length 13024002
location 7208480 ~ 7212838 (+)
genome version v1_2015/06_NatureGenetics_grasscarp_Genome

Sequence

>CI01000006_07208843_07212249.mRNA
ATATATAAGCAGAGATTCCGTATGTTTGAGACGGCGCTTACATATAAATTCGTGAATATCTCCTTTTCCTCATACTAAGAAATTGTGTTTCATTGACGAATTCGTCTATCCACGATAGAAGCCCGCAGCTGTGGAGTTACAGCGGCGCTCGGCCCTCGACAGAGGTGAAGGTGACTCGCCTGTTGGTGCGGGAGATGCAGAGGAAGCGTCGCGGACGCTCGCTCGGCTCCGTCACATCACTCTAATCATCGACGGCAGAGAAACAACAGCCCTCATCCAAGGATCGACCTCACCCTCGAATCGAGGACAGACGGATTAAAGACATTTTCTCAGTGAGGTGGTTTTATTCGTGGATGCGTATGCATGTGTTCTGCACCGAACGGGCGAAAGAACCGCCCCAGATCCGCAGCCAACATTTTTCAAATCGGCAAGTCTTCGATGAGGGATCCGGAGCGCCGGGAGAGCACCGAGAGCACGCGGAGAGCTCAGCGGGCGATGGATGACTGTAGAACGACCGTTCAGGAGTTCAACACTCTAGTGGCCCTCCATCGTGAGCAGGTCATCTCCATAGGGGAGAATACAATCGACTGTCCTTCTTTAAGGGCACAGATGCACAAGACTCGCATCAAAGGATGTGCCGTAGCCCAGGCCGCCTATCAAAACCTTGATGCAATCTCTGGGCCAGAGGATGGTGAAATCCACCCAGAAATATGCAGGTTGTTCATCCAGCTTCAGTGCTGCCTGGAGATGTACATTACAGAAATGCTGAAGTCTATGTGTCTGTTGGGTGTTCTGCAGCTCCATAGGAAAGGTGTTGTGTCAATGACAGCCAGCAGAGGACAGCAGATTCTTTACATAAGCAGACATGAGTACATAAAGCTAATATACTGCATGGCGAAATACTACTGGCAGGCTGAAGGAAATGATGCGTGTCCTGAACCAAATATGGACTGCAGAGTAGACGAAAGCTCTGATGTGCCGATGCTGGAAGATCGTTCATCATCACCTGTAGATTTTCCACAGGAATCTTGGGTCGTGTGCGCAGACATTGAGAACATTGAGAGTGATATGCGAGAAATGAGAAACCTTCTAAGCAAACTCAGGGAGACCATGCCTTTGCCACTGAAAAATCAAGATGACAGCAGTCTGCTAAATCTGACTCCTTATCCACTGGTGAGGCAGAGGAAGAGGCGATTCTCCGGGCTTTGTTGCCTTGTGTCTGGCTGAACCTTCAATACTCTCAAGTCTTCTTTTCTGATCATTGATCAATTAGTGCTTCACTCATCTCCTTTGTGTCTTTGGAACTGTTTCGCTAATGTAACGTGTCCCTGGACAGTGTCAAAACTACTTAATCACTTGTTGGAGGACAGAATTCCCTTGATTCAAAACCCTGCCTGTTGCGTTCTAAAGCAAAATCAATTGTCTATTTTTAGTTACCAAGAGGTTCATTCTTTGTCATGTGCTGTGAAACCATATGATTGTATAAAAAAGCAAGTGAATGAAGTGAAATAATAACATCTGTCTCTGATGTTCTTTTATCATGGTTAGAGTTGTCAGTAAAAGGGCACATTTAGTTATAGTATTGCTGTTTTTCATCTACCTGCTTCTTTTTTTTCTTTTTTCTTTTATATAAATTTAGCCACTGTGCAATGCTTTTAATTTAGTCTTCCATAAAGGGGAAATGTTGTAAAAAATTATATCAGTCATTGTAAGGGCACAAGAGCGCTCTGCACTAAAGCCATTGCTATTTCATTCTAAGCTTGAAACAAATATAACACAATACAATTCACAATGTACATAATACAAATAATTGTAA

Function

symbol description
rgs7bpb Predicted to be involved in G protein-coupled receptor signaling pathway. Predicted to act upstream of or within negative regulation of signal transduction. Predicted to be located in cytoplasm and plasma membrane. Predicted to be active in neuron projection; nucleus; and postsynapse. Orthologous to human RGS7BP (regulator of G protein signaling 7 binding protein).

GO:

id name namespace
GO:0005737 cytoplasm cellular_component

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
CI01000006_07208843_07212249.mRNA True 1816 mRNA 0.44 6 7208480 7212838

Neighbor

gene id symbol gene type direction distance location
CI01000006_07203185_07207649 NA coding upstream 820 7203185 ~ 7207660 (+)
CI01000006_07194003_07196123 NA coding upstream 12125 7193722 ~ 7196355 (+)
CI01000006_07167131_07168925 NA coding upstream 39555 7166778 ~ 7168925 (+)
CI01000006_07121418_07160572 ANK1 coding upstream 47655 7121169 ~ 7160825 (+)
CI01000006_07078406_07080719 NA coding upstream 127550 7076952 ~ 7080930 (+)
CI01000006_07214841_07222648 C6 coding downstream 2003 7214841 ~ 7222817 (+)
CI01000006_07243073_07247934 GHR coding downstream 30235 7243073 ~ 7248022 (+)
CI01000006_07249033_07250723 NA coding downstream 35600 7248438 ~ 7250895 (+)
CI01000006_07254728_07260352 NA coding downstream 41423 7254261 ~ 7260434 (+)
CI01000006_07328380_07352585 NA coding downstream 115145 7327983 ~ 7353137 (+)
G44821 NA non-coding upstream 35033 7173217 ~ 7173447 (+)
G44794 NA non-coding upstream 43773 7162480 ~ 7164707 (+)
G44818 NA non-coding upstream 144313 7063827 ~ 7064167 (+)
G44817 NA non-coding upstream 144696 7063521 ~ 7063784 (+)
G44780 NA non-coding upstream 213103 6992868 ~ 6995377 (+)
G44793 NA non-coding downstream 10084 7222922 ~ 7312257 (+)
G44851 NA non-coding downstream 101987 7314825 ~ 7315134 (+)
G44852 NA non-coding downstream 102373 7315211 ~ 7315553 (+)
G44853 NA non-coding downstream 102883 7315721 ~ 7315980 (+)
G44854 NA non-coding downstream 103333 7316171 ~ 7316492 (+)
CI01000006_06122278_06122736 NA other upstream 1079805 6122035 ~ 6122751 (+)
CI01000006_06104927_06109730 NA other upstream 1098892 6104927 ~ 6109820 (+)
G43896 NA other upstream 1436705 5770089 ~ 5771775 (+)
G41996 NA other upstream 2084331 5117206 ~ 5124149 (+)
G44872 NA other downstream 143514 7356352 ~ 7387884 (+)
G45178 NA other downstream 409153 7607604 ~ 7683671 (+)
G45265 NA other downstream 671029 7883867 ~ 7920355 (+)
G45336 NA other downstream 806504 8019342 ~ 8021951 (+)
CI01000006_08198328_08199463 NA other downstream 946678 8197881 ~ 8200145 (+)

Expression


Co-expression Network

Homologous

species gene id symbol gene type chromosome NCBI id location