CI01000006_07254728_07260352


Basic Information

Item Value
gene id CI01000006_07254728_07260352
gene name NA
gene type coding
species grasscarp (Ctenopharyngodon idella)
category of species economic fish

Chromosome Information

Item Value
chromosome id CI01000006
NCBI id null
chromosome length 13024002
location 7254261 ~ 7260434 (+)
genome version v1_2015/06_NatureGenetics_grasscarp_Genome

Sequence

>CI01000006_07254728_07260352.mRNA
CTATAAAAAAGAACAGCAGCCATGTATTAGTCTACTGCGAGAGCACAGCGGTAAGATACATTATTTTACGCTTCCTAATATTGTGTAGATTTAGTCAACAAAGCTTGTTAACTTTTAAAATGTTGTCGAAGTGTATTCAATGCATATAGGGCTGAAATAGATAACATAAAATTATTAATAAGGTGAAGTAAATCTATTTATGTGATTAGCATTACTATGGGCTGCAGTTATATGTTCATGTCAGCTATTCATTTTGATTCTGTTTGGACAATTTTACAAAATTCACTGCTGTACCGCTTTTGGAATTATTTCGTACTCTAGAACAAGAAGATTATATGTTTTTACTGTTATCCATATGCATTGCACACACATACACATATATTAATTTCTATGAATGCAAGCAAACATTGTGAGCTTTAACTAATTTGCCTCTTGGTTACTGTTTTTCAGCCTTAAGCAGCTGCAAAATGCCTGCACGGGCAAGTCAGGTGTCGCCACAGGTGCATCGGCACAACCTTTACACTCTGACGGACAGCTCAGAATGTGGGTCAGACAAGGAAGAGGAGGAAGACCCTTCCAAGCACCTGACACCCCTGGAAAAATTAACGCTGGAAATGTGCAATGATGAAAACACCATAAAGGAGCTGACGGTGGGCAGAAGGGTTGGCTTCTACAAAGTCCGTGGTCAGATTGGCTGTGGGAACTTTTCGAAGGTCAAACTGGCCGTCCATGCCCTCACCAAAGACAAGGTTGCCATTAAGATTATGGATAAGATGAGGCTCGATCTGCAGACCCAGAGGATGCTGTCCAGAGAGATCTCCAACATGGAGTGCTTGTATCACCCAAATTTATTGCAGCTCTATGAAGTACTGGAGACGCCAAGTCGGTTGTACCTGGTTCTTGAGTTTGCTGGAGGAGGAGACCTCCACACCAGAATCAGCTCTGGAGGAAAACTCTCTGACCGAGAAAGCAAGATTGTATTCGCCCAAATCCTGTCAGCTGTCAAATACATGCACGAGAACAACATCATCCATCGAGATCTGAAGGCTGAAAATGTTCTTTATACAACCGACTCCTGCATAAAAGTGGCTGACTTTGGCTTCAGCAAGAAGGTCAAGAATCGCAACCAAGCCCTAGACACCTTTTGCGGCTCTCCTCCTTATGCAGCTCCGGAGCTCTTCAAAGATGAGTCTTACATCGGGCCACCTGTGGATGTGTGGGCAATGGGTGTCCTCCTCTTTTTCATGGTGACTGGCACCTTGCCTTTCCGTGCTGACACTGTGGCCAAGTTGCGTCAAAGTGTGCTGGAGGGGGCCTATGTCCTGCCAACCTGGGTATCAGCTCCGTGTCAGCGGCTGATCCGGGGGATACTGAAGCCAGAACCGTTAGAGCGATGCGCACTGGACCAGATGTTGGGTTGTGAGTGGCTGTTGCCGGTGGAACTCTTTCGCCCTATTCCTCCCTTATACCAGCTCAACCCCATTCATCTGCTTGAGGCCGGTCCAGGGGAGTTAGACAGAGACCAGGAGGAGGTAAAAGGTATGTTGGAGAAACTAGGAGTCTCTGACGAACATATTGTCAATAACCAAGGAAAGCGCATTCGTAGTCCCATTACAGGGGTTTACCGCATACTTTTGCACAGAGTTAAGAAAAACAGGGGAGTTGAGTCTGCGCCTACAATCAGTGGAGTCGTCAAAGATCCTAAAAGAGACAGTCTACGTGCCTACAGGAATCTACGGCACTCCTCAAAACTCCCGTCTTTCAACGCTGAGAGCTGCAGCAATCCGTGCAGAAGCCATGGGCGGTTAGTAAACAATACAGCAACTGACAGGGAGCCATACGATTGGCAGCCTAACACTCACCCCCGCGACACCGCCTTCACCTCCCATCTGCGCTGCTTGGCAGATGGAGTAGCGTCGTGGCTCAGACATCTGCCGAGAGTCGACTTCTTACAAAGGCCTGAAAACAGGTTACTTATATTGGCCTATAGGCTACATTTATCTCTTAATCAGACTGATTGGCATACTGCTTATGTATGGACAAAACATGGAAAGAAAATTGCAATAAGAGTAAAACAGCAGATTTTGCTGCAGAGACCTGTAAAGAAAAAGTAGATGTTAGACCATAGTTTCTCTTTTGCTGCAATATAATTTTTCATTATAGGCTATTTTTAGCCAATTCAGTTTAGATTATTAA

Function

NR:

description
unnamed protein product

GO:

id name namespace
GO:0005737 cytoplasm cellular_component

KEGG:

id description
K16310 NIM1; serine/threonine-protein kinase NIM1

RNA

RNA id representative length rna type GC content exon number start site end site
CI01000006_07254728_07260352.mRNA True 2196 mRNA 0.45 6 7254261 7260434

Neighbor

gene id symbol gene type direction distance location
CI01000006_07249033_07250723 NA coding upstream 3366 7248438 ~ 7250895 (+)
CI01000006_07243073_07247934 GHR coding upstream 6239 7243073 ~ 7248022 (+)
CI01000006_07214841_07222648 C6 coding upstream 31444 7214841 ~ 7222817 (+)
CI01000006_07208843_07212249 RGS7BPB coding upstream 41423 7208480 ~ 7212838 (+)
CI01000006_07203185_07207649 NA coding upstream 46601 7203185 ~ 7207660 (+)
CI01000006_07328380_07352585 NA coding downstream 67549 7327983 ~ 7353137 (+)
CI01000006_07458458_07460310 ATP5I, ATP5IA coding downstream 197679 7458113 ~ 7460310 (+)
CI01000006_07477200_07478617 RBP4L coding downstream 216494 7476928 ~ 7478786 (+)
CI01000006_07486574_07490054 SLC26A1 coding downstream 225544 7485978 ~ 7490576 (+)
CI01000006_07492187_07498391 NA coding downstream 231753 7492187 ~ 7498674 (+)
G44821 NA non-coding upstream 80814 7173217 ~ 7173447 (+)
G44794 NA non-coding upstream 89554 7162480 ~ 7164707 (+)
G44818 NA non-coding upstream 190094 7063827 ~ 7064167 (+)
G44817 NA non-coding upstream 190477 7063521 ~ 7063784 (+)
G44780 NA non-coding upstream 258884 6992868 ~ 6995377 (+)
G44851 NA non-coding downstream 54391 7314825 ~ 7315134 (+)
G44852 NA non-coding downstream 54777 7315211 ~ 7315553 (+)
G44853 NA non-coding downstream 55287 7315721 ~ 7315980 (+)
G44854 NA non-coding downstream 55737 7316171 ~ 7316492 (+)
G44855 NA non-coding downstream 57649 7318083 ~ 7318298 (+)
CI01000006_07167131_07168925 NA other upstream 83727 7166778 ~ 7168925 (+)
CI01000006_06122278_06122736 NA other upstream 1125586 6122035 ~ 6122751 (+)
CI01000006_06104927_06109730 NA other upstream 1144673 6104927 ~ 6109820 (+)
G43896 NA other upstream 1482486 5770089 ~ 5771775 (+)
G41996 NA other upstream 2130112 5117206 ~ 5124149 (+)
G44872 NA other downstream 95918 7356352 ~ 7387884 (+)
G45178 NA other downstream 361557 7607604 ~ 7683671 (+)
G45265 NA other downstream 623433 7883867 ~ 7920355 (+)
G45336 NA other downstream 758908 8019342 ~ 8021951 (+)
CI01000006_08198328_08199463 NA other downstream 899082 8197881 ~ 8200145 (+)

Expression


Co-expression Network