CI01000006_07458458_07460310 (ATP5I, ATP5IA)


Basic Information

Item Value
gene id CI01000006_07458458_07460310
gene name ATP5I, ATP5IA
gene type misc
species grasscarp (Ctenopharyngodon idella)
category of species economic fish

Chromosome Information

Item Value
chromosome id CI01000006
NCBI id null
chromosome length 13024002
location 7458113 ~ 7460310 (+)
genome version v1_2015/06_NatureGenetics_grasscarp_Genome

Sequence

>CI01000006_07458458_07460310.mRNA
TTATAAAATGAATGAGTGAAAATAAATAGGCTACCCATTGTTACTTGAGAGAATATGCAGTATTTGTACTTCAAAAAACATTTTAGTATTTTTTACTACTACTACTATAAACGTTATTACCCTATGTTAATAGAATATTTATACTTCAATGAATTAGAATTCCACTCAATTGTCACACTATAGGTAGAATATTTGAATGAACTGCTAAAAAGGTTGATAAAATGTTGAAAAAAAGTCACAAAAGTTAATGGACATTAGTGCAGTGTACTGATAGTAGGGAGAATCAATCAGCCCAGAGCGCGCACTGACTGTTTTCCTCTCCTGCCTGAAGAGATCCATTCAAACATGGTTCCTCCCGTACAGGTCTCCCCGCTTATCAAGACAGCAAGATGGTCCGCCTTGCTAATTGGATTAATTTATGGGAAGCAGAGATATGATTATCTGAAGCCCATTGCTGCTGAAGAAAGAAGGATTGAGGAGGAAGAGAAGAAACTCAGGGAAGAGCAAGAGCGCATTTACAAACAGCTATCTGAAG

Function

symbol description
atp5i F-type H+-transporting ATPase subunit e

GO:

id name namespace
GO:0000276 mitochondrial proton-transporting ATP synthase complex, coupling factor F(o) cellular_component

KEGG:

id description
K02129 ATPeF0E, ATP5I; F-type H+-transporting ATPase subunit e

RNA

RNA id representative length rna type GC content exon number start site end site
CI01000006_07458458_07460310.mRNA False 535 mRNA 0.37 3 7458113 7460310

Neighbor

gene id symbol gene type direction distance location
CI01000006_07328380_07352585 NA coding upstream 104976 7327983 ~ 7353137 (+)
CI01000006_07254728_07260352 NA coding upstream 197679 7254261 ~ 7260434 (+)
CI01000006_07249033_07250723 NA coding upstream 207218 7248438 ~ 7250895 (+)
CI01000006_07243073_07247934 GHR coding upstream 210091 7243073 ~ 7248022 (+)
CI01000006_07214841_07222648 C6 coding upstream 235296 7214841 ~ 7222817 (+)
CI01000006_07477200_07478617 RBP4L coding downstream 16618 7476928 ~ 7478786 (+)
CI01000006_07486574_07490054 SLC26A1 coding downstream 25668 7485978 ~ 7490576 (+)
CI01000006_07492187_07498391 NA coding downstream 31877 7492187 ~ 7498674 (+)
CI01000006_07577082_07582303 DUSP4 coding downstream 116088 7576398 ~ 7582313 (+)
CI01000006_07692311_07693192 PPP1R3B coding downstream 231930 7692240 ~ 7694117 (+)
G44859 NA non-coding upstream 132171 7325698 ~ 7325942 (+)
G44850 NA non-coding upstream 137418 7320374 ~ 7320695 (+)
G44857 NA non-coding upstream 137790 7320068 ~ 7320323 (+)
G44856 NA non-coding upstream 138180 7319715 ~ 7319933 (+)
G44855 NA non-coding upstream 139815 7318083 ~ 7318298 (+)
G45116 NA non-coding downstream 12392 7472702 ~ 7472906 (+)
G45120 NA non-coding downstream 18999 7479309 ~ 7479512 (+)
G45122 NA non-coding downstream 21379 7481689 ~ 7481888 (+)
G45134 NA non-coding downstream 60848 7521158 ~ 7522043 (+)
G45135 NA non-coding downstream 61933 7522243 ~ 7522618 (+)
G44872 NA other upstream 70229 7356352 ~ 7387884 (+)
CI01000006_07167131_07168925 NA other upstream 287579 7166778 ~ 7168925 (+)
CI01000006_06122278_06122736 NA other upstream 1329438 6122035 ~ 6122751 (+)
CI01000006_06104927_06109730 NA other upstream 1348525 6104927 ~ 6109820 (+)
G43896 NA other upstream 1686338 5770089 ~ 5771775 (+)
G45178 NA other downstream 161681 7607604 ~ 7683671 (+)
G45265 NA other downstream 423557 7883867 ~ 7920355 (+)
G45336 NA other downstream 559032 8019342 ~ 8021951 (+)
CI01000006_08198328_08199463 NA other downstream 699206 8197881 ~ 8200145 (+)
G45355 NA other downstream 749245 8209555 ~ 8212388 (+)

Expression


Co-expression Network