G45116


Basic Information

Item Value
gene id G45116
gene name NA
gene type non-coding
species grasscarp (Ctenopharyngodon idella)
category of species economic fish

Chromosome Information

Item Value
chromosome id CI01000006
NCBI id null
chromosome length 13024002
location 7472702 ~ 7472906 (+)
genome version v1_2015/06_NatureGenetics_grasscarp_Genome

Sequence

>TU51277
CAGTCAAACCAAAAATTATTCAGACATTTTTTATATATTTTTACTAGTGGGTGCAGGACACTATAGTTCATTTATGTAAGTGAGGATAGCAAAATAAAGTAAACTGTGACATATTATACCCAAAAATTCTTCATACAGTGGACTACCAGTAAAACTGATAAAAATTTGGAACCAAAAATTATTCAGACACTTTGACCTTACCATG

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU51277 True 205 lncRNA 0.34 1 7472702 7472906

Neighbor

gene id symbol gene type direction distance location
CI01000006_07458458_07460310 ATP5I, ATP5IA coding upstream 12392 7458113 ~ 7460310 (+)
CI01000006_07328380_07352585 NA coding upstream 119565 7327983 ~ 7353137 (+)
CI01000006_07254728_07260352 NA coding upstream 212268 7254261 ~ 7260434 (+)
CI01000006_07249033_07250723 NA coding upstream 221807 7248438 ~ 7250895 (+)
CI01000006_07243073_07247934 GHR coding upstream 224680 7243073 ~ 7248022 (+)
CI01000006_07477200_07478617 RBP4L coding downstream 4022 7476928 ~ 7478786 (+)
CI01000006_07486574_07490054 SLC26A1 coding downstream 13072 7485978 ~ 7490576 (+)
CI01000006_07492187_07498391 NA coding downstream 19281 7492187 ~ 7498674 (+)
CI01000006_07577082_07582303 DUSP4 coding downstream 103492 7576398 ~ 7582313 (+)
CI01000006_07692311_07693192 PPP1R3B coding downstream 219334 7692240 ~ 7694117 (+)
G44859 NA non-coding upstream 146760 7325698 ~ 7325942 (+)
G44850 NA non-coding upstream 152007 7320374 ~ 7320695 (+)
G44857 NA non-coding upstream 152379 7320068 ~ 7320323 (+)
G44856 NA non-coding upstream 152769 7319715 ~ 7319933 (+)
G45120 NA non-coding downstream 6403 7479309 ~ 7479512 (+)
G45122 NA non-coding downstream 8783 7481689 ~ 7481888 (+)
G45134 NA non-coding downstream 48252 7521158 ~ 7522043 (+)
G45135 NA non-coding downstream 49337 7522243 ~ 7522618 (+)
G45136 NA non-coding downstream 50491 7523397 ~ 7523630 (+)
G44872 NA other upstream 84818 7356352 ~ 7387884 (+)
CI01000006_07167131_07168925 NA other upstream 302168 7166778 ~ 7168925 (+)
CI01000006_06122278_06122736 NA other upstream 1344027 6122035 ~ 6122751 (+)
CI01000006_06104927_06109730 NA other upstream 1363114 6104927 ~ 6109820 (+)
G43896 NA other upstream 1700927 5770089 ~ 5771775 (+)
G45178 NA other downstream 149085 7607604 ~ 7683671 (+)
G45265 NA other downstream 410961 7883867 ~ 7920355 (+)
G45336 NA other downstream 546436 8019342 ~ 8021951 (+)
CI01000006_08198328_08199463 NA other downstream 686610 8197881 ~ 8200145 (+)
G45355 NA other downstream 736649 8209555 ~ 8212388 (+)

Expression


Co-expression Network