CI01000006_07072315_07073358


Basic Information

Item Value
gene id CI01000006_07072315_07073358
gene name NA
gene type coding
species grasscarp (Ctenopharyngodon idella)
category of species economic fish

Chromosome Information

Item Value
chromosome id CI01000006
NCBI id null
chromosome length 13024002
location 7071668 ~ 7073411 (+)
genome version v1_2015/06_NatureGenetics_grasscarp_Genome

Sequence

>CI01000006_07072315_07073358.mRNA
ATTTAAATATAAGTGGAATTTCTAGATGGTCATAGATATGCTAGGAGAAATCAGTCATGTAGAGAACCTTCACAGTAAGCTGTATGCAAAACTAGCAATCGTACATCCTGTTCATCTGCTTTTATTTTTAAATGATGGCATTGACGTGTTAAATATTATATGAAGATCTGATAGTCTTAACCGGTGTTGCTATATCAGCTTGAACACATGAAATTATGATCCAGCTGTTAAACGTGTGTATATTTTGTAAGTACATTTACATTTTATGTGTATTATTTGTTTGATTGACATGTGTGTTGCCTCACTCTTAACACTCAGTGCTTATTTTTCAGTGAGTCTTACTGCCAAATTATCAAATGCAGGTATGTGGGTATTCTTGTGTTCATGAATTATAACATTTTTATTTAATAGTTGGTTTCTAAATTGAACTTATGCAGTTTTTATTATGTAAAACTGTTGAAACTACAAATAACAGCATCACACTCTGAAATGTATAGTGAAATTTTGGCACTGAAATATTTTTTAATTAGATTCTCCCAGCATGCCAAAGTCATAATATGGTCACTGCACACTATTAATTTTTACATGTTTGTTTAATATTTATCATTCAACCCCTATATACAGATATCTCTGTTAGTCTTGGAGCGATGACTCTCAGTGGCTCGGCTGAACTGACATGCTGTGAACGGGACCAGAATATATCACAGTGCATTTTCTATGCTGGATCAAGAAACATTGGCCATCGAAATTCCTCTGACCATTGCTGTAAGCTCACCGTCAGTAGAGAAGAACTGTTACAGGGGAAAGCTGGCGAGGAGCTCCGAACAACAATTACCATCTACTGTACAAGCAGACCTGACAACATAAGCCAAAATGTCACCATTACAGTGTGGAGGCCAGCTGTTTTTCGCTTTGCTTTTCTGGTTATACTGGGGACACTGACTCTCCTCTCTTTGCTGATGGTCATCGTATTCATATGCATTATCTACAAGACCAAAAATCAAGAGAATAAACAAAACCAAAGTGCAAATTCTGGTACAGTTGAAGTGCAGGAAGAGAAAACAGAGGTAGTAGAGGATGAGCTATTGTATGCCACAGTGAATCATTCAGCTGCTGGTGAAAACTTTGCTCCTGCAGTGAAGTATGAATCAGGAACTGACTACGCCACAGTGGTCATACACTGAATAACCTGCAACACTGGATGGAAAAGACTTTTCATGGATTTAAATCACCAAAG

Function

NR:

description
hypothetical protein cypCar_00001475

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
CI01000006_07072315_07073358.mRNA True 1237 mRNA 0.37 4 7071668 7073411

Neighbor

gene id symbol gene type direction distance location
CI01000006_07066344_07070484 FTSJ1 coding upstream 413 7066344 ~ 7071255 (+)
CI01000006_06987083_06990215 NA coding upstream 81310 6987083 ~ 6990358 (+)
CI01000006_06955035_06961818 PPM1NB, PPM1N coding upstream 109463 6955035 ~ 6962205 (+)
CI01000006_06898410_06913888 NECTIN3, PVRL3B coding upstream 157722 6898410 ~ 6913946 (+)
CI01000006_06853100_06858970 OR133-7 coding upstream 212235 6852831 ~ 6859433 (+)
CI01000006_07078406_07080719 NA coding downstream 3541 7076952 ~ 7080930 (+)
CI01000006_07121418_07160572 ANK1 coding downstream 47758 7121169 ~ 7160825 (+)
CI01000006_07167131_07168925 NA coding downstream 93367 7166778 ~ 7168925 (+)
CI01000006_07194003_07196123 NA coding downstream 120311 7193722 ~ 7196355 (+)
CI01000006_07203185_07207649 NA coding downstream 129774 7203185 ~ 7207660 (+)
G44818 NA non-coding upstream 7501 7063827 ~ 7064167 (+)
G44817 NA non-coding upstream 7884 7063521 ~ 7063784 (+)
G44780 NA non-coding upstream 76291 6992868 ~ 6995377 (+)
G44747 NA non-coding upstream 94784 6976398 ~ 6976884 (+)
G44755 NA non-coding upstream 100852 6970504 ~ 6970816 (+)
G44794 NA non-coding downstream 89069 7162480 ~ 7164707 (+)
G44821 NA non-coding downstream 99806 7173217 ~ 7173447 (+)
G44793 NA non-coding downstream 149511 7222922 ~ 7312257 (+)
G44851 NA non-coding downstream 241414 7314825 ~ 7315134 (+)
G44852 NA non-coding downstream 241800 7315211 ~ 7315553 (+)
CI01000006_06122278_06122736 NA other upstream 942993 6122035 ~ 6122751 (+)
CI01000006_06104927_06109730 NA other upstream 962080 6104927 ~ 6109820 (+)
G43896 NA other upstream 1299893 5770089 ~ 5771775 (+)
G41996 NA other upstream 1947519 5117206 ~ 5124149 (+)
CI01000006_03734862_03735227 BANF1, BANF1.S, BANF1.L other upstream 3335690 3734554 ~ 3736035 (+)
G44872 NA other downstream 282941 7356352 ~ 7387884 (+)
G45178 NA other downstream 548580 7607604 ~ 7683671 (+)
G45265 NA other downstream 810456 7883867 ~ 7920355 (+)
G45336 NA other downstream 945931 8019342 ~ 8021951 (+)

Expression


Co-expression Network