G44747


Basic Information

Item Value
gene id G44747
gene name NA
gene type non-coding
species grasscarp (Ctenopharyngodon idella)
category of species economic fish

Chromosome Information

Item Value
chromosome id CI01000006
NCBI id null
chromosome length 13024002
location 6976398 ~ 6976884 (+)
genome version v1_2015/06_NatureGenetics_grasscarp_Genome

Sequence

>TU50866
CTGCATCCCAGTGACAGCAGTGTACAGCTCTTTACACTGCACACTGTCGGTCTTCAGCCAGCCCAGCAAAGCCAGCTGCAACCTGCTGAATCAACTGGACATCTGTCATCCCGTTTGACTCCGCCATACTTTATTATTGACAAGTTATTATTGTATGAGATTAATATTAACCAGTTAACTATAAACTACAGCTAAAATTTCGTTGTTTGCTTTTGTGACACAGCTTACATGATCTTCCTGTTTACACACTAGCTTGTTCTACTTCCTCCAATGAA

Function

NR:

description
PREDICTED: 26S proteasome non-ATPase regulatory subunit 1 isoform X1

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU50866 True 275 lncRNA 0.55 2 6976398 6976884

Neighbor

gene id symbol gene type direction distance location
CI01000006_06955035_06961818 PPM1NB, PPM1N coding upstream 14193 6955035 ~ 6962205 (+)
CI01000006_06898410_06913888 NECTIN3, PVRL3B coding upstream 62452 6898410 ~ 6913946 (+)
CI01000006_06853100_06858970 OR133-7 coding upstream 116965 6852831 ~ 6859433 (+)
CI01000006_06847369_06848340 OR133-1 coding upstream 127687 6846954 ~ 6848711 (+)
CI01000006_06838948_06839904 NA coding upstream 136144 6838775 ~ 6840254 (+)
CI01000006_06987083_06990215 NA coding downstream 10199 6987083 ~ 6990358 (+)
CI01000006_07066344_07070484 FTSJ1 coding downstream 89460 7066344 ~ 7071255 (+)
CI01000006_07072315_07073358 NA coding downstream 94784 7071668 ~ 7073411 (+)
CI01000006_07078406_07080719 NA coding downstream 100068 7076952 ~ 7080930 (+)
CI01000006_07121418_07160572 ANK1 coding downstream 144285 7121169 ~ 7160825 (+)
G44755 NA non-coding upstream 5582 6970504 ~ 6970816 (+)
G44745 NA non-coding upstream 12874 6945655 ~ 6963524 (+)
G44210 NA non-coding upstream 127241 6848942 ~ 6849157 (+)
G44196 NA non-coding upstream 143128 6833001 ~ 6833270 (+)
G44780 NA non-coding downstream 15984 6992868 ~ 6995377 (+)
G44817 NA non-coding downstream 86637 7063521 ~ 7063784 (+)
G44818 NA non-coding downstream 86943 7063827 ~ 7064167 (+)
G44794 NA non-coding downstream 185596 7162480 ~ 7164707 (+)
G44821 NA non-coding downstream 196333 7173217 ~ 7173447 (+)
CI01000006_06122278_06122736 NA other upstream 847723 6122035 ~ 6122751 (+)
CI01000006_06104927_06109730 NA other upstream 866810 6104927 ~ 6109820 (+)
G43896 NA other upstream 1204623 5770089 ~ 5771775 (+)
G41996 NA other upstream 1852249 5117206 ~ 5124149 (+)
CI01000006_03734862_03735227 BANF1, BANF1.S, BANF1.L other upstream 3240420 3734554 ~ 3736035 (+)
CI01000006_07167131_07168925 NA other downstream 189905 7166778 ~ 7168925 (+)
G44872 NA other downstream 379468 7356352 ~ 7387884 (+)
G45178 NA other downstream 645107 7607604 ~ 7683671 (+)
G45265 NA other downstream 906983 7883867 ~ 7920355 (+)
G45336 NA other downstream 1042458 8019342 ~ 8021951 (+)

Expression


Co-expression Network