G45297


Basic Information

Item Value
gene id G45297
gene name NA
gene type non-coding
species grasscarp (Ctenopharyngodon idella)
category of species economic fish

Chromosome Information

Item Value
chromosome id CI01000006
NCBI id null
chromosome length 13024002
location 7946257 ~ 7946975 (+)
genome version v1_2015/06_NatureGenetics_grasscarp_Genome

Sequence

>TU51491
GTGAACATTATGGAGCGCTAACCCTTGCACAGAAAGTCCAAAAATGCACTCATAAGGGCTTTTCACACTTGAAAAAGTTAACCCTGGGTCGTTCTAAACCCCGGGTAAACAGATTCCTGGGTTATCTTGCTTCACGTTTCACACTGCTCATAATTTACCCGGGGTTAACAATTAATCCTGGGTACTCATAAGCTGACGTTTCACATTGTACATTCCTAAACCCTGAGTTAACGTTCTTATTTGCATATTTGCGGCGTCAGTGTCATTGATTGGATAAACGCAGCACGCGACCTGTTTACATAGGCTAGCTCTAGCATTGCGCATCCTCGTATTGCCGACTGTACTACCGAGTTTATACTGAATGGACATTTCGGACTATAAAGGTAAGAATGAAATGGCTGGTAAAATCCCAAATAAAAAGCAGTGATAACCCCGCTTCTAAATTACAAGTGTGAAATGTTCATTTACCCGGGGTTAAAGGCGGTGTTTAGAACAATGATAACCCAAGGTTAAGCGCAGTATGAAAAGCCCTTATAAAGGTAATAACTTATGGACAAAGGCACCCAACTATCTGTAGCTGAATAAAATACAGACACGTTTTGACTGAAACATGAAGACAATAAATACATTATTGCGACAATATATAATTTATATGTTTTTCAAGCCATATTTTCATAACAATAAAGTATATGAATAATGCAGTGCTAATTGACATATCC

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU51491 True 719 lncRNA 0.50 1 7946257 7946975

Neighbor

gene id symbol gene type direction distance location
CI01000006_07939608_07940846 RXFP3 coding upstream 4842 7939318 ~ 7941415 (+)
CI01000006_07757777_07795187 NNT.L, NNT coding upstream 150999 7757526 ~ 7795258 (+)
CI01000006_07699736_07726659 MFHAS1 coding upstream 219260 7699736 ~ 7726997 (+)
CI01000006_07694812_07698078 ERI1 coding upstream 247823 7694812 ~ 7698434 (+)
CI01000006_07692311_07693192 PPP1R3B coding upstream 252140 7692240 ~ 7694117 (+)
CI01000006_08025159_08032131 NA coding downstream 78184 8025159 ~ 8032623 (+)
CI01000006_08108713_08122179 NA coding downstream 161588 8108563 ~ 8122364 (+)
CI01000006_08184916_08188512 NEFMA coding downstream 237824 8184799 ~ 8189299 (+)
CI01000006_08198328_08199463 NA coding downstream 251222 8197881 ~ 8200145 (+)
CI01000006_08222787_08225568 MED15 coding downstream 275812 8222787 ~ 8225568 (+)
G45265 NA non-coding upstream 25902 7883867 ~ 7920355 (+)
G45249 NA non-coding upstream 114850 7831162 ~ 7831407 (+)
G45244 NA non-coding upstream 126523 7819113 ~ 7819734 (+)
G45201 NA non-coding upstream 197298 7734809 ~ 7748959 (+)
G45233 NA non-coding upstream 260081 7685958 ~ 7686176 (+)
G45303 NA non-coding downstream 8071 7955046 ~ 7955249 (+)
G45308 NA non-coding downstream 24057 7971032 ~ 7971805 (+)
G45322 NA non-coding downstream 45658 7992633 ~ 7992865 (+)
G45325 NA non-coding downstream 46877 7993852 ~ 7994217 (+)
G45316 NA non-coding downstream 57336 8004311 ~ 8005552 (+)
G45178 NA other upstream 262586 7607604 ~ 7683671 (+)
G44872 NA other upstream 558373 7356352 ~ 7387884 (+)
CI01000006_07167131_07168925 NA other upstream 775723 7166778 ~ 7168925 (+)
CI01000006_06122278_06122736 NA other upstream 1817582 6122035 ~ 6122751 (+)
G45336 NA other downstream 72367 8019342 ~ 8021951 (+)
G45355 NA other downstream 262580 8209555 ~ 8212388 (+)
G45416 NA other downstream 871839 8818814 ~ 8834697 (+)
G46652 NA other downstream 2209604 10156579 ~ 10159251 (+)

Expression


Co-expression Network