G46383


Basic Information

Item Value
gene id G46383
gene name NA
gene type non-coding
species grasscarp (Ctenopharyngodon idella)
category of species economic fish

Chromosome Information

Item Value
chromosome id CI01000006
NCBI id null
chromosome length 13024002
location 9416020 ~ 9416289 (+)
genome version v1_2015/06_NatureGenetics_grasscarp_Genome

Sequence

>TU52746
TTTTAACAAGAAATGAAGTATGTCAGGAAAGAAAATTAATATTAAAAAATATTTATAGAAGATTTACTCATTTAAACTAGTTTTTAATTATTCAGTTTGGGTTAAAGTATGGTGTATTATAAAAAACTAAACTAAACTAGCCAGAAAATATGATATATAAACATTATTTTAGTTATTACACAGACAACAATATAGGCTCTTGCATACCCAAATCAAACCCGAGTTTGCTGGCTTTTCTCGCTGAGTTTGCTGTGTTGTAAACATGTTCAC

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU52746 True 270 lncRNA 0.27 1 9416020 9416289

Neighbor

gene id symbol gene type direction distance location
CI01000006_09334843_09337295 FAM216A coding upstream 78617 9334801 ~ 9337403 (+)
CI01000006_09320331_09321778 UB2G1, UBE2G1A, UBE2G1, UBE2G1B coding upstream 94242 9320331 ~ 9321778 (+)
CI01000006_09192219_09195918 NA coding upstream 220036 9191897 ~ 9195984 (+)
CI01000006_09107491_09114820 GTF3C4 coding upstream 300949 9106826 ~ 9115071 (+)
CI01000006_09105004_09106470 NA coding upstream 309057 9104215 ~ 9106963 (+)
CI01000006_09497508_09511925 NA coding downstream 80517 9496806 ~ 9512720 (+)
CI01000006_09569228_09574340 NA coding downstream 151991 9568280 ~ 9575061 (+)
CI01000006_09712289_09783579 UNC5DA coding downstream 296000 9712289 ~ 9783579 (+)
CI01000006_09836923_09844045 NA coding downstream 420634 9836923 ~ 9846207 (+)
CI01000006_09884959_09889794 NA coding downstream 468150 9884439 ~ 9890289 (+)
G46371 NA non-coding upstream 37686 9378059 ~ 9378334 (+)
G46360 NA non-coding upstream 64605 9351198 ~ 9351415 (+)
G46273 NA non-coding upstream 89502 9280325 ~ 9326518 (+)
G46278 NA non-coding upstream 132125 9190362 ~ 9283895 (+)
G46325 NA non-coding upstream 190603 9218451 ~ 9225417 (+)
G46470 NA non-coding downstream 30156 9446445 ~ 9446677 (+)
G46483 NA non-coding downstream 54093 9470382 ~ 9484816 (+)
G46507 NA non-coding downstream 94135 9510424 ~ 9510669 (+)
G46519 NA non-coding downstream 120644 9536933 ~ 9537485 (+)
G46530 NA non-coding downstream 129573 9545862 ~ 9546073 (+)
G45416 NA other upstream 581323 8818814 ~ 8834697 (+)
G45355 NA other upstream 1203632 8209555 ~ 8212388 (+)
CI01000006_08198328_08199463 NA other upstream 1215875 8197881 ~ 8200145 (+)
G45336 NA other upstream 1394069 8019342 ~ 8021951 (+)
G45265 NA other upstream 1495665 7883867 ~ 7920355 (+)
G46652 NA other downstream 740290 10156579 ~ 10159251 (+)
G47145 NA other downstream 1069069 10485358 ~ 10511806 (+)
G47159 NA other downstream 1999940 11416229 ~ 11521703 (+)
G47318 NA other downstream 2207978 11624267 ~ 11638252 (+)
G48094 NA other downstream 2861331 12277620 ~ 12279541 (+)

Expression


Co-expression Network