Gene
RNA
| Item | Value |
|---|---|
| gene id | G48094 |
| gene name | NA |
| gene type | unknown |
| species | grasscarp (Ctenopharyngodon idella) |
| category of species | economic fish |
| Item | Value |
|---|---|
| chromosome id | CI01000006 |
| NCBI id | null |
| chromosome length | 13024002 |
| location | 12277620 ~ 12279541 (+) |
| genome version | v1_2015/06_NatureGenetics_grasscarp_Genome |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| TU54708 | True | 561 | TUCP | 0.54 | 4 | 12277620 | 12279541 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| CI01000006_12242654_12249350 | NOP56, NOP56.L | coding | upstream | 28065 | 12242654 ~ 12249555 (+) |
| CI01000006_12230746_12235389 | NA | coding | upstream | 42095 | 12229547 ~ 12235525 (+) |
| CI01000006_12219317_12222975 | TPGS2 | coding | upstream | 54503 | 12219317 ~ 12223117 (+) |
| CI01000006_12176092_12189504 | NA | coding | upstream | 87792 | 12176092 ~ 12189828 (+) |
| CI01000006_12092807_12095434 | NA | coding | upstream | 181952 | 12092389 ~ 12095668 (+) |
| CI01000006_12298229_12304430 | UB2R2, CDC34, UBE2R2, UBE2R2.S, CDC34A, CDC34B | coding | downstream | 18256 | 12297797 ~ 12304603 (+) |
| CI01000006_12307031_12307314 | NA | coding | downstream | 27490 | 12307031 ~ 12307319 (+) |
| CI01000006_12315343_12316143 | RFESD | coding | downstream | 35758 | 12315299 ~ 12316231 (+) |
| CI01000006_12345828_12346634 | NA | coding | downstream | 66287 | 12345828 ~ 12346920 (+) |
| CI01000006_12447621_12461167 | NA | coding | downstream | 168080 | 12447621 ~ 12461191 (+) |
| G48086 | NA | non-coding | upstream | 16276 | 12259495 ~ 12261344 (+) |
| G48214 | NA | non-coding | upstream | 49366 | 12228047 ~ 12228254 (+) |
| G48119 | NA | non-coding | upstream | 119914 | 12143871 ~ 12157706 (+) |
| G48113 | NA | non-coding | upstream | 159600 | 12103183 ~ 12118020 (+) |
| G48146 | NA | non-coding | upstream | 272117 | 12005256 ~ 12005503 (+) |
| G48101 | NA | non-coding | downstream | 28601 | 12308142 ~ 12349571 (+) |
| G48075 | NA | non-coding | downstream | 71221 | 12350762 ~ 12571161 (+) |
| G48251 | NA | non-coding | downstream | 217813 | 12497354 ~ 12500200 (+) |
| G48122 | NA | non-coding | downstream | 239805 | 12519346 ~ 12532674 (+) |
| G48270 | NA | non-coding | downstream | 297954 | 12577495 ~ 12577940 (+) |
| G47318 | NA | other | upstream | 639368 | 11624267 ~ 11638252 (+) |
| G47159 | NA | other | upstream | 755917 | 11416229 ~ 11521703 (+) |
| G47145 | NA | other | upstream | 1765814 | 10485358 ~ 10511806 (+) |
| G46652 | NA | other | upstream | 2118369 | 10156579 ~ 10159251 (+) |
| G45416 | NA | other | upstream | 3442923 | 8818814 ~ 8834697 (+) |
| G48081 | NA | other | downstream | 97465 | 12377006 ~ 12384827 (+) |
