G48146


Basic Information

Item Value
gene id G48146
gene name NA
gene type non-coding
species grasscarp (Ctenopharyngodon idella)
category of species economic fish

Chromosome Information

Item Value
chromosome id CI01000006
NCBI id null
chromosome length 13024002
location 12005256 ~ 12005503 (+)
genome version v1_2015/06_NatureGenetics_grasscarp_Genome

Sequence

>TU54760
TAACAACAATAACAAAAAAAGAATAAGACAATGTAAAAAAAAAAAAAAAACTGTACAAACATTAAGAATATTTCTGATTCTAGTTTTGTCCACTGGTTGCTGTCTCTCTTAGATTGTGGCAAGCTGTTACGTATTTTGCTGCTGTTGCAATCAATTTGCTGTTTTCTCCTAGAATATAATTTATTTTTTCTGTATTTGAAGATGCCATAAATTTTGGTTCTAGTAGCTGGAATTTAGTGAAATAGTCT

Function

NR:

description
copper homeostasis protein cutC homolog isoform X1

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU54760 True 248 lncRNA 0.48 1 12005256 12005503

Neighbor

gene id symbol gene type direction distance location
CI01000006_11888383_11923287 NA coding upstream 80866 11888192 ~ 11924390 (+)
CI01000006_11784520_11803562 NA coding upstream 201406 11782031 ~ 11803850 (+)
CI01000006_11751944_11752854 NA coding upstream 252038 11750854 ~ 11753218 (+)
CI01000006_11704767_11714559 WDR34 coding upstream 290595 11704767 ~ 11714661 (+)
CI01000006_11546432_11575289 NSMFA coding upstream 429780 11546432 ~ 11575476 (+)
CI01000006_12092807_12095434 NA coding downstream 86886 12092389 ~ 12095668 (+)
CI01000006_12176092_12189504 NA coding downstream 170589 12176092 ~ 12189828 (+)
CI01000006_12219317_12222975 TPGS2 coding downstream 213814 12219317 ~ 12223117 (+)
CI01000006_12230746_12235389 NA coding downstream 224044 12229547 ~ 12235525 (+)
CI01000006_12242654_12249350 NOP56, NOP56.L coding downstream 237151 12242654 ~ 12249555 (+)
G48067 NA non-coding upstream 23150 11981856 ~ 11982106 (+)
G47948 NA non-coding upstream 128205 11876815 ~ 11877051 (+)
G47916 NA non-coding upstream 167065 11837752 ~ 11838191 (+)
G47912 NA non-coding upstream 170768 11834232 ~ 11834488 (+)
G47390 NA non-coding upstream 214823 11790211 ~ 11790433 (+)
G48113 NA non-coding downstream 97680 12103183 ~ 12118020 (+)
G48119 NA non-coding downstream 138368 12143871 ~ 12157706 (+)
G48214 NA non-coding downstream 222544 12228047 ~ 12228254 (+)
G48086 NA non-coding downstream 253992 12259495 ~ 12261344 (+)
G48101 NA non-coding downstream 302639 12308142 ~ 12349571 (+)
G47318 NA other upstream 367004 11624267 ~ 11638252 (+)
G47159 NA other upstream 483553 11416229 ~ 11521703 (+)
G47145 NA other upstream 1493450 10485358 ~ 10511806 (+)
G46652 NA other upstream 1846005 10156579 ~ 10159251 (+)
G45416 NA other upstream 3170559 8818814 ~ 8834697 (+)
G48094 NA other downstream 272117 12277620 ~ 12279541 (+)
G48081 NA other downstream 371503 12377006 ~ 12384827 (+)

Expression


Co-expression Network