CI01000006_12345828_12346634


Basic Information

Item Value
gene id CI01000006_12345828_12346634
gene name NA
gene type coding
species grasscarp (Ctenopharyngodon idella)
category of species economic fish

Chromosome Information

Item Value
chromosome id CI01000006
NCBI id null
chromosome length 13024002
location 12345828 ~ 12346920 (+)
genome version v1_2015/06_NatureGenetics_grasscarp_Genome

Sequence

>CI01000006_12345828_12346634.mRNA
TGTCACAACGCTGACCAGCTATATGTCTGGCTCCTCCATTTCATTGCCAATAACTACCTGATCTTCAGCCACAAGCCTGACTTCTTGGAGCTATCAGATGAGGAGCGTGAGCAGGTGGAGCGGCTGCGCTGGCCATCCAGAGGCTACCTACAGGAGCTCAGTGAGTACCAGCAACGCAGGCGGCAGATCCGCAAGTCTCGCTGTAGCATCATGTGACCCCTTCTTGACGCCCTACGGACCGGAAGGGAGGGCGAAAAACAGAGGATGCAAATTGGAGATGTATTTACATACAGGATGAAAGAGACCTTTGTTTGACCTCTGGGTTAAAGGTGGATTCTGATGTACTGTATTTACACATGAACTTTGACCAGTGACCCTGTGATATAAAGCGGACAGCTGTGAATTCACTGGATTTGAGCGGATCCTATGCGACATTGTCATATAGATCTCTTCTATGTGGATACTGTATCTTCTGTACGAACGATTACACCTGATTGGTGCA

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
CI01000006_12345828_12346634.mRNA True 502 mRNA 0.49 2 12345828 12346920

Neighbor

gene id symbol gene type direction distance location
CI01000006_12315343_12316143 RFESD coding upstream 29597 12315299 ~ 12316231 (+)
CI01000006_12307031_12307314 NA coding upstream 38509 12307031 ~ 12307319 (+)
CI01000006_12298229_12304430 UB2R2, CDC34, UBE2R2, UBE2R2.S, CDC34A, CDC34B coding upstream 41225 12297797 ~ 12304603 (+)
CI01000006_12242654_12249350 NOP56, NOP56.L coding upstream 96273 12242654 ~ 12249555 (+)
CI01000006_12230746_12235389 NA coding upstream 110303 12229547 ~ 12235525 (+)
CI01000006_12447621_12461167 NA coding downstream 100701 12447621 ~ 12461191 (+)
CI01000006_12592270_12606447 NA coding downstream 244918 12591838 ~ 12607314 (+)
CI01000006_12608120_12620040 NA coding downstream 261200 12608120 ~ 12620111 (+)
CI01000006_12684154_12695960 DNAJC21 coding downstream 336641 12683561 ~ 12696396 (+)
CI01000006_12764729_12782405 NA coding downstream 416996 12763916 ~ 12783368 (+)
G48086 NA non-coding upstream 84484 12259495 ~ 12261344 (+)
G48214 NA non-coding upstream 117574 12228047 ~ 12228254 (+)
G48119 NA non-coding upstream 188122 12143871 ~ 12157706 (+)
G48113 NA non-coding upstream 227808 12103183 ~ 12118020 (+)
G48146 NA non-coding upstream 340325 12005256 ~ 12005503 (+)
G48075 NA non-coding downstream 3842 12350762 ~ 12571161 (+)
G48251 NA non-coding downstream 150434 12497354 ~ 12500200 (+)
G48122 NA non-coding downstream 172426 12519346 ~ 12532674 (+)
G48270 NA non-coding downstream 230575 12577495 ~ 12577940 (+)
G48079 NA non-coding downstream 233405 12580325 ~ 12582476 (+)
G48094 NA other upstream 66287 12277620 ~ 12279541 (+)
G47318 NA other upstream 707576 11624267 ~ 11638252 (+)
G47159 NA other upstream 824125 11416229 ~ 11521703 (+)
G47145 NA other upstream 1834022 10485358 ~ 10511806 (+)
G46652 NA other upstream 2186577 10156579 ~ 10159251 (+)
G48081 NA other downstream 30086 12377006 ~ 12384827 (+)

Expression


Co-expression Network

Homologous

species gene id symbol gene type chromosome NCBI id location