Gene
RNA
| Item | Value |
|---|---|
| gene id | G47638 |
| gene name | NA |
| gene type | non-coding |
| species | grasscarp (Ctenopharyngodon idella) |
| category of species | economic fish |
| Item | Value |
|---|---|
| chromosome id | CI01000006 |
| NCBI id | null |
| chromosome length | 13024002 |
| location | 10974694 ~ 10988803 (-) |
| genome version | v1_2015/06_NatureGenetics_grasscarp_Genome |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| TU54186 | True | 252 | lncRNA | 0.46 | 2 | 10974694 | 10988803 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| CI01000006_10676705_10699710 | NA | coding | downstream | 274812 | 10676367 ~ 10699882 (-) |
| CI01000006_10499329_10508831 | NA | coding | downstream | 465039 | 10499240 ~ 10509655 (-) |
| CI01000006_10453630_10483241 | NA | coding | downstream | 490688 | 10453613 ~ 10484006 (-) |
| CI01000006_10402704_10447782 | NA | coding | downstream | 525593 | 10402695 ~ 10449101 (-) |
| CI01000006_10372387_10387314 | NA | coding | downstream | 587092 | 10372129 ~ 10387602 (-) |
| CI01000006_11320839_11338355 | STXBP1, STXBP1A | coding | upstream | 331659 | 11320462 ~ 11338355 (-) |
| CI01000006_11388077_11391485 | NA | coding | upstream | 398691 | 11387494 ~ 11391485 (-) |
| CI01000006_11459706_11462546 | NA | coding | upstream | 470485 | 11459288 ~ 11462605 (-) |
| CI01000006_11530728_11535297 | NA | coding | upstream | 541563 | 11530366 ~ 11535900 (-) |
| CI01000006_11596063_11609407 | NA | coding | upstream | 606836 | 11595639 ~ 11609407 (-) |
| G47622 | NA | non-coding | downstream | 49084 | 10917556 ~ 10925610 (-) |
| G47618 | NA | non-coding | downstream | 60596 | 10913811 ~ 10914098 (-) |
| G47584 | NA | non-coding | downstream | 61455 | 10862069 ~ 10913239 (-) |
| G47601 | NA | non-coding | downstream | 69407 | 10904852 ~ 10905287 (-) |
| G47583 | NA | non-coding | downstream | 100926 | 10837059 ~ 10873768 (-) |
| G47654 | NA | non-coding | upstream | 28960 | 11017763 ~ 11019209 (-) |
| G47668 | NA | non-coding | upstream | 66100 | 11054903 ~ 11055581 (-) |
| G47673 | NA | non-coding | upstream | 74870 | 11063673 ~ 11069048 (-) |
| G47681 | NA | non-coding | upstream | 122811 | 11111614 ~ 11115511 (-) |
| G47758 | NA | non-coding | upstream | 298832 | 11287635 ~ 11292481 (-) |
| CI01000006_07500281_07507754 | NA | other | downstream | 3463738 | 7500246 ~ 7507976 (-) |
| CI01000006_06974359_06976736 | NA | other | downstream | 3997822 | 6973224 ~ 6976872 (-) |
| CI01000006_04560607_04560993 | NA | other | downstream | 6412626 | 4559509 ~ 4562068 (-) |
| G43549 | NA | other | downstream | 6619266 | 4352510 ~ 4355428 (-) |
| G47658 | NA | other | upstream | 42108 | 11030911 ~ 11033127 (-) |
| CI01000006_11651067_11653761 | SMD3, SNRPD3, SNRPD3L, MGC52856 | other | upstream | 661560 | 11650363 ~ 11654424 (-) |
| CI01000006_12348300_12348961 | GLRX | other | upstream | 1345606 | 12347180 ~ 12349383 (-) |
| CI01000006_12569291_12581457 | CELL, CEL.2, CEL.1 | other | upstream | 1361956 | 12569205 ~ 12582487 (-) |
