G79974


Basic Information

Item Value
gene id G79974
gene name NA
gene type non-coding
species mexican tetra (Astyanax mexicanus)
category of species ornamental fish

Chromosome Information

Item Value
chromosome id NC_035905.1
NCBI id CM008308.1
chromosome length 42966623
location 12281860 ~ 12282910 (-)
genome version Astyanax_mexicanus-2.0_2017_mexican_tetra_Genome

Sequence

>TU107729
CTCACATCAACATCATTAATCACTGCATACATCAACATCATTAATCACTGCtcacatcaacatcattaatcactgctcacatcaacatcattaatcactgctcacatcaacatcaacatcattaatcactgctcacatcaacatcaacatcattaatcactgctcacatcaacatcattaatcactgctcacatcaacatcattaatcactgctcacatcaacatcattaattactgctcac

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU107729 True 242 lncRNA 0.36 2 12281860 12282910

Neighbor

gene id symbol gene type direction distance location
rlf NA coding downstream 131144 12125827 ~ 12150716 (-)
pdzd8 pdzd8 coding downstream 473278 11642590 ~ 11808582 (-)
ttc27 ttc27,LOC107689788 coding downstream 918652 11220363 ~ 11363208 (-)
LOC111193129 NA coding downstream 1073176 11205127 ~ 11208684 (-)
rasgrp3 rasgrp3,LOC107744459,LOC107670874,LOC107689794,LOC106576952 coding downstream 1345597 10822882 ~ 10936263 (-)
yipf4 yipf4,LOC107744423,LOC107670878,LOC106576945 coding upstream 236553 12519463 ~ 12524837 (-)
LOC103024740 LOC103024740,LOC108413681 coding upstream 447716 12730626 ~ 12735104 (-)
LOC103046657 NA coding upstream 539005 12821915 ~ 12835548 (-)
LOC103047466 papss2a,papss2,LOC108411876,LOC105900838,LOC107715960,LOC107583551,LOC107553500,LOC107670849,LOC107689802 coding upstream 638850 12921760 ~ 12950947 (-)
LOC103025372 LOC103025372 coding upstream 673460 12956370 ~ 12967635 (-)
G79941 NA non-coding downstream 145200 12135984 ~ 12136660 (-)
LOC103044551 NA non-coding downstream 217394 12063309 ~ 12064466 (-)
G79861 NA non-coding downstream 241430 11955343 ~ 12040430 (-)
G79991 NA non-coding upstream 81200 12364110 ~ 12364962 (-)
G80047 NA non-coding upstream 257235 12540145 ~ 12543272 (-)
G80060 NA non-coding upstream 300323 12583233 ~ 12583861 (-)
G80105 pank1,pank1a,LOC107689800,LOC107553481 non-coding upstream 499703 12782613 ~ 12791587 (-)
G80125 slc16a12,slc16a12a,LOC107689836,LOC107715954,LOC107744897,LOC107583546 non-coding upstream 535479 12818389 ~ 12818642 (-)
G79945 NA other downstream 89832 12157586 ~ 12192028 (-)
G79865 NA other downstream 309921 11969441 ~ 11971939 (-)
ltbp1 ltbp1 other downstream 1097919 10941687 ~ 11183941 (-)
G79582 NA other downstream 1352264 10928640 ~ 10929596 (-)
LOC103027264 NA other downstream 1945144 10294488 ~ 10336716 (-)
ncmap NA other upstream 51489 12334399 ~ 12372804 (-)
edaradd edaradd other upstream 302252 12585162 ~ 12613731 (-)
LOC103046962 ptena,LOC108411875,LOC107670848,LOC101171856,LOC105900832,LOC105940225,LOC104929647,LOC103387686 other upstream 589079 12871989 ~ 12912395 (-)
selenon selenon,sepn1 other upstream 738207 13021117 ~ 13037306 (-)
LOC111193198 NA other upstream 893126 13176036 ~ 13176676 (-)

Expression


Co-expression Network