LOC111193148


Basic Information

Item Value
gene id LOC111193148
gene name NA
gene type non-coding
species mexican tetra (Astyanax mexicanus)
category of species ornamental fish

Chromosome Information

Item Value
chromosome id NC_035905.1
NCBI id CM008308.1
chromosome length 42966623
location 33938460 ~ 33938701 (-)
genome version Astyanax_mexicanus-2.0_2017_mexican_tetra_Genome

Sequence

>XR_002650288.1
catcacagctgttaactgaaagtctgaattccaggtgactctacctcataaagctgactgagaaaatgcagccaaCATGTGAAAAACTGTCATCTAATCAAAAGaacaagatCATCATGAATGATTCAACATATCTGCAACTCGAG

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
XR_002650288.1 True 146 ncRNA 0.38 2 33938460 33938701

Neighbor

gene id symbol gene type direction distance location
LOC103040637 si:dkey-16j16.4,LOC108423460,LOC107697539,LOC107566112,LOC107553735,LOC107656750,LOC108270219 coding downstream 28453 33857299 ~ 33910007 (-)
supt7l supt7l,LOC107726086,LOC107656753,LOC107553729,LOC107737450,LOC107697525 coding downstream 108717 33820065 ~ 33829743 (-)
LOC103041514 lrfn2,LOC107703608,LOC107754970 coding downstream 462771 33201802 ~ 33475689 (-)
clip4 clip4,LOC107676111 coding downstream 907071 32938106 ~ 33031389 (-)
LOC111193155 NA coding downstream 1454627 32442573 ~ 32483833 (-)
zdhhc14 zdhhc14,LOC106574720,LOC105897223 coding upstream 860438 34799139 ~ 34867074 (-)
LOC103041141 LOC108423399 coding upstream 931444 34870145 ~ 35195330 (-)
cldn20 cldn20,LOC101886267,LOC107571061,LOC107675320,LOC107573130,LOC108443299,LOC107728965 coding upstream 1382768 35321469 ~ 35337462 (-)
tiam2 tiam2 coding upstream 1409483 35348184 ~ 35510745 (-)
scaf8 scaf8,LOC107749595,LOC107675315 coding upstream 1618507 35557208 ~ 35600287 (-)
G85617 NA non-coding downstream 88691 33848560 ~ 33849769 (-)
LOC111193147 NA non-coding downstream 134939 33765923 ~ 33803521 (-)
G85561 NA non-coding downstream 301887 33636239 ~ 33636573 (-)
G85542 NA non-coding downstream 445439 33492460 ~ 33493021 (-)
G85528 NA non-coding downstream 628367 33247051 ~ 33310093 (-)
G85654 NA non-coding upstream 267528 34206229 ~ 34206807 (-)
G85659 fosl2,LOC107656746,LOC107726077,LOC107553732 non-coding upstream 284204 34222905 ~ 34226742 (-)
G85660 NA non-coding upstream 292190 34230891 ~ 34231119 (-)
G85687 NA non-coding upstream 328755 34267456 ~ 34331347 (-)
G85715 NA non-coding upstream 610902 34549603 ~ 34550024 (-)
G85618 slc4a1ap other downstream 98831 33834012 ~ 33839629 (-)
G85550 NA other downstream 419789 33509680 ~ 33518671 (-)
G85501 NA other downstream 826726 33111474 ~ 33111734 (-)
LOC111193156 NA other downstream 1446640 32449631 ~ 32491820 (-)
mrpl34 mrpl34 other downstream 3115762 30820119 ~ 30822698 (-)
rbks rbks,LOC107553733,LOC107656748 other upstream 16494 33955195 ~ 34012562 (-)
daam2 daam2 other upstream 335690 34274391 ~ 34471605 (-)
G85902 tfb1m other upstream 1349531 35288232 ~ 35295034 (-)
nrxn3 nrxn3,LOC107755774,LOC107583487 other upstream 2650203 36588904 ~ 37101581 (-)
G86432 NA other upstream 4044173 37982874 ~ 38069052 (-)

Expression


Co-expression Network