CI01000009_07361747_07377615 (EPC2)


Basic Information

Item Value
gene id CI01000009_07361747_07377615
gene name EPC2
gene type coding
species grasscarp (Ctenopharyngodon idella)
category of species economic fish

Chromosome Information

Item Value
chromosome id CI01000009
NCBI id null
chromosome length 16003125
location 7361747 ~ 7378451 (+)
genome version v1_2015/06_NatureGenetics_grasscarp_Genome

Sequence

>CI01000009_07361747_07377615.mRNA
ATGAGTAAACTCTCGTTCCGCGCGCGAGCGCTAGACGCCGCCAAACCGCTGCCGATCTACCGCAATAAAGACCTCCCGGACCTCACCGACTGCGTCTCCATCAACCGAGCGGTCCCACAAATGCCAACCGGGATGGAAAAGGAAGAGGAGTCGGAGCACCATCTCCAGAGGGCCATCTCCGCCCAGCAGGTATTCAGGGAGAAGAAGGAGAGCATGGTCATCCCTGTGCCAGAGGCAGAGAGTAACATCACCTATTACGACCGCCTTTACAAAGGAGAGTTCCGCATCCCCAAACAGCTCATCCACATCCAGCCTCTGGGTCTGGATAACGAGCTGCCTGACTATGATATGGACTCAGAGGACGAGACTTTACTGAACAGACTCAACCGCAAGATGGAGCTCAGACCTGTGCAGTTTGAGACCATGATGGACCGGTTAGAGAAAGCCAGCACCAACCAGGAGGCCAAGCTGCTGCTAAATGAAGATGACTACCTGTTGAAGTCAGTGTATGACTACTGGGTGAGGAAGAGGAAGAACTGCCGGGGCCCGTCGCTCATCCCACAAATCAAGCAGGAGAAGAGGGATGGCTCCACCAATAACGATGCTTACGTGGCCTTCAGGCGTCGCACAGAGAAGATGCAGACTAGGAAGAATCGCAAGAATGACGAGGCGTCTTATGAAAAGATGCTGAAGCTGAGAAGAGAGTTCAGCCGAACCATGAGCATCCTGGAGATGATCAAAAAGAGAGAGAAGAGCAAACGAGAGCTGCTGCATCTGACGCTGGAGGTGTTTGAAAAAAGATATCAAATTGGAGACTTCTCAGGAGAGATTCTGAATGAAGTCACTGTACCTCTGGCAGAGAAAACCATTTACCCTGCACCCACATCCTTACCCATGAGCAGTCGGCACAAGGTAGAGAGCAAAATGAAGTCACACAAATCTGGGCCCAAACACCTCCACCCCTTCACAGTCAAGCCTGAGCCTCACTTTGACTTTGTGCGTTCTCATAAGAAGTACAACAAGAGGCCCAAACTTGATGCATTTCGCCAGCCTGGTCGGCCAGAGCGACAGCAAACCATCATCAAGGCAGACATTAAACAATACGACTTCCACAGCTCTGGAGAGGAGGATTACCCACTGCCACTGGTGGATCAGAGCTGCTCTCCTCACTGGCAGCAGGCGGATCAGGACCGGCTGTGGCAGAGGAACTGTCTCACCGCCCTCTCTGTGCCTAAACGCTGTATCGCAGTTGCACACAGGAGGGTGGGCAGAGGTGGCAGGGTTGTTTTGGATCGTACCTCGTCGGAACTGGACCGTGCACTCAGGCATCTGGACCCTGACATGTTTTATCCCTCCGCTGGCTCTAGTGTGCCTGACCTCCCCGTCCATACAAACACAAACTCTCACATCTCCAAATCAAGCCCTGAGCGCTCACTGACTCAGCTCCTGAATGACATCCAGGCCTGCAGGTGGAAGTTTTTCCGCCCTCGGGCGCTACAGGACAACTCAAGGAGTGAGGACAAGAAAGGGACTCCGCAGGTCGAAAAAGGTGGAGGGACGCATCTCTCTAACAGTGTGTCAGGTGGGTTCACAGAAGAGCAGTTTCACTCCCATCAGCAGCAGCTGGTTCAGATGCACAAACAGTTACAGCAGCAAGAACTCCAGCAGAACTCGACAGCACCAGAACCCCACACACACCTGCCTAACACGGCCTCATCTGACTGCATGTCTAAGACTCTGGACTCGGCTAGTGCACACTTTGCTGCCTCTGCTGTGGTCAACACTCCCAACAATGAAAACAGGCCCCAGATTGCAAGAAGCTTTAGACAAGCCAAATCGAACCGTTCTGCAGGTGGTGGAGGTGGTGGTGAGTCAGGCTCTTTAGTACGGATGACAAGCACATCTGGCATTCAGCTGCCGGTCCCTCAGTCTCTGCCTCACGGCCATGGGCACCTGAGCACCGTGAGCGCTGTGTCTCCTGCCCACACGCACCACAGTGCACGTCTGTGTGCCCCTTCACCCTCAGCCTTAAAGCTAGCCAGTGTTGCTAGTAGTCTGGACCGGGTACCCAAAGTCACCCCCACTAGTGCCATCGACATCGCCAGGTCTGAAACCTGACACAGCACTTAATCACTTCCTCTTCTTTTTTGGGGCCTATGGTGAAAAATGAATTCAAGTATCTATGCTTCAAAATTTTGGGGTCTGTAGGATTTTTTTTATTGTCTTCAAAAGAAGTCTCTTATTAGGGATGGATATCGGTTTTAACGGTATTACTACTGTTACCGATACTGCTTATCGATCCAGTACTTTTCTTATCGGTTCTTTTTGTCAAATGAAATGAAATGTAAAATAAATATTATTTAAAATTGCAAAAGAAACAACAATGTTTGAACAAAACAAATGAATATAAAACATCTATTTGTAAATGCACCAGTGTGCAGCCATTTTTAGTGTTTTATATACATAAGATAAAAAAAAGTACAAACAAACTGACAAATAAAAAAAAAAAAACAATAAAACAAAGATAAAAATGAAATAAACAGTGCTACTAACATTACTGTTCAGGTAAGTAATGTAGACTACAAAAGAAATCTAACAAAGTAATCAAATGAAAAATAAGAAGCCCGAAGCCCAAAGTATAATTTGCTTGTCTAGTTGTGAACCGTTTCAGAGCATGCAGACAGAAAACCTGCAAGTCTCTTGCGGGAATTATTGTGCTTTCAATATCTTTTTTATTATCAAACACGTCCCACAACTTGGCAACAGTAGAGACTGCATTTTACCAAAATCACTGATTGTGCTGATTCTGATGTTAAGTTTGGGCTTTTAGGGAGGGACGAATGTGCACCACTGAAGAAAGGGAAGCTGCACTACACGGAATGTGACTTTTTTTAATAGTTTTACCTCAAACATGTTCTTTTTATAGTCCTTGGAATCCAAAATCAAAAACAAAA

Function

symbol description
epc2 Predicted to contribute to histone acetyltransferase activity. Acts upstream of or within primitive erythrocyte differentiation. Predicted to be located in nucleus. Predicted to be part of Piccolo NuA4 histone acetyltransferase complex. Orthologous to human EPC2 (enhancer of polycomb homolog 2).

GO:

id name namespace
GO:0032777 Piccolo NuA4 histone acetyltransferase complex cellular_component

KEGG:

id description
K11322 EPC; enhancer of polycomb-like protein

RNA

RNA id representative length rna type GC content exon number start site end site
CI01000009_07361747_07377615.mRNA True 2954 mRNA 0.48 12 7361747 7378451

Neighbor

gene id symbol gene type direction distance location
CI01000009_07316335_07346664 ACVR2A, ACVR2AA coding upstream 15083 7316335 ~ 7346664 (+)
CI01000009_07111833_07115320 NA coding upstream 246325 7110351 ~ 7115443 (+)
CI01000009_07101768_07105835 NA coding upstream 255738 7101269 ~ 7106009 (+)
CI01000009_07091022_07092696 NA coding upstream 268946 7090918 ~ 7092801 (+)
CI01000009_07051811_07054331 NA coding upstream 307122 7050718 ~ 7054625 (+)
CI01000009_07392574_07395739 MED4.S, MED4 coding downstream 14030 7392481 ~ 7395770 (+)
CI01000009_07440170_07459782 HTR2A, HTR2AA coding downstream 61588 7440039 ~ 7460409 (+)
CI01000009_07490344_07493862 ESTD, ESD coding downstream 111797 7490248 ~ 7493862 (+)
CI01000009_07543034_07544161 NA coding downstream 164583 7543034 ~ 7544161 (+)
CI01000009_07545007_07550103 NA coding downstream 166556 7545007 ~ 7550729 (+)
G54999 NA non-coding upstream 65472 7296023 ~ 7296275 (+)
G54992 NA non-coding upstream 71894 7289596 ~ 7289853 (+)
G54964 NA non-coding upstream 124233 7237307 ~ 7237514 (+)
G54957 NA non-coding upstream 133171 7227451 ~ 7228576 (+)
G54958 NA non-coding upstream 134660 7225141 ~ 7227087 (+)
G55013 NA non-coding downstream 25624 7404075 ~ 7404335 (+)
G55009 NA non-coding downstream 85677 7464128 ~ 7464458 (+)
G55030 NA non-coding downstream 105767 7484218 ~ 7484503 (+)
G55032 NA non-coding downstream 108362 7486813 ~ 7487030 (+)
G55057 NA non-coding downstream 173421 7551872 ~ 7552121 (+)
G53651 NA other upstream 1113355 6245564 ~ 6248392 (+)
CI01000009_05931829_05943829 KCNH3 other upstream 1428946 5931718 ~ 5943899 (+)
G53388 NA other upstream 1822693 5522242 ~ 5540638 (+)
CI01000009_03202999_03207060 MPC2, MPC2.S other upstream 4152763 3202207 ~ 3208984 (+)
G51529 NA other upstream 4299160 3062033 ~ 3062587 (+)
G56100 NA other downstream 1750849 9129300 ~ 9130286 (+)
CI01000009_09853929_09854476 SAP18 other downstream 2474908 9853929 ~ 9856587 (+)
CI01000009_11761868_11765848 ORMDL1.S, ORMDL1 other downstream 4382335 11761606 ~ 11766944 (+)
G57811 NA other downstream 4555491 11933942 ~ 11935251 (+)
CI01000009_12432736_12435509 NA other downstream 5054107 12432538 ~ 12436017 (+)

Expression


Co-expression Network

Homologous

species gene id symbol gene type chromosome NCBI id location