G10561


Basic Information

Item Value
gene id G10561
gene name NA
gene type non-coding
species mexican tetra (Astyanax mexicanus)
category of species ornamental fish

Chromosome Information

Item Value
chromosome id NC_035898.1
NCBI id CM008301.1
chromosome length 34292151
location 14306272 ~ 14306530 (-)
genome version Astyanax_mexicanus-2.0_2017_mexican_tetra_Genome

Sequence

>TU14253
gcaaacaactacaaaaaaacaaggcaaggagaatataaaactagaacaaagactaagaaacacagactactAAACTAAGACTAGGATACATACGGACAGCAAGGATACGAACGGACAGCGAGGATACAGAGGAtacaaaagatacaaaagactcaacactgaacattcaaacagaggggcttaaatacaagaggagagtgagaaacacctgggctaggatgacaagggggcggggttatagacaagacacaggtgagaa

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU14253 True 259 lncRNA 0.42 1 14306272 14306530

Neighbor

gene id symbol gene type direction distance location
LOC103039514 LOC108427305 coding downstream 14110 14248674 ~ 14292162 (-)
LOC103035550 paqr4,paqr4a,LOC105897660,LOC106601588 coding downstream 109032 14166440 ~ 14197240 (-)
LOC103035240 LOC103035240,LOC108427335,LOC107658445,LOC107729508,LOC108280773,LOC107583063 coding downstream 157990 14117591 ~ 14148282 (-)
LOC103038885 shank1,LOC108427331,LOC107732841 coding downstream 341434 13683879 ~ 13964838 (-)
LOC103033311 si:ch211-51c14.1,LOC108427330,LOC107732900,LOC107729493,LOC107551153,LOC105012945,LOC106595301 coding downstream 634590 13631779 ~ 13671682 (-)
LOC111193418 NA coding upstream 24472 14331002 ~ 14333447 (-)
armc5 armc5 coding upstream 35390 14341920 ~ 14350288 (-)
LOC103037078 LOC103037078,LOC108427313 coding upstream 47822 14354352 ~ 14360091 (-)
LOC103036770 tceb2,LOC103036770,LOC108427344,LOC107564001,LOC108280902,LOC105012960 coding upstream 55104 14361634 ~ 14371508 (-)
arl6ip1 arl6ip1,LOC107658451 coding upstream 77704 14384234 ~ 14398697 (-)
G10430 NA non-coding downstream 284383 14021687 ~ 14021889 (-)
G10429 NA non-coding downstream 295859 14010176 ~ 14010413 (-)
G10413 NA non-coding downstream 388434 13917124 ~ 13917838 (-)
G10379 NA non-coding downstream 630979 13673955 ~ 13675293 (-)
G10303 NA non-coding downstream 720353 13585450 ~ 13585919 (-)
G10595 NA non-coding upstream 386252 14692782 ~ 14694894 (-)
G10649 NA non-coding upstream 400803 14707333 ~ 14708613 (-)
G10654 NA non-coding upstream 464800 14771330 ~ 14771618 (-)
G10782 polr3d non-coding upstream 712761 15019291 ~ 15020115 (-)
LOC111194139 NA non-coding upstream 781341 15087871 ~ 15089128 (-)
G10560 NA other downstream 62478 14241061 ~ 14243794 (-)
LOC103034594 ppp1caa,LOC103034594,LOC105897688,LOC108280818,LOC103367324,LOC101477563,LOC105894037 other downstream 223165 14038858 ~ 14083107 (-)
LOC103034410 lrrc4b,lrrc4ba,LOC103034410,LOC107680881,LOC107551155,LOC107667844,LOC107563987,LOC107732840 other downstream 1013394 13149357 ~ 13292878 (-)
G10089 akt1s1,LOC107564011,LOC107680841 other downstream 1489086 12813025 ~ 12817186 (-)
LOC103022087 foxd1,LOC103022087,LOC106569011,LOC108432165 other downstream 2628164 11676154 ~ 11678108 (-)
hsd3b7 hsd3b7,LOC106601563 other upstream 312846 14619376 ~ 14656561 (-)
LOC103040656 LOC108427315 other upstream 481540 14788070 ~ 14797643 (-)
G10767 NA other upstream 616435 14922965 ~ 14923959 (-)
LOC103043825 pax10,LOC108427317,LOC107689663,LOC108280587,LOC107557340,LOC107579793 other upstream 654302 14960832 ~ 14981569 (-)
G10808 prmt1,LOC107729532,LOC107658485,LOC107689671 other upstream 966225 15272755 ~ 15278437 (-)

Expression


Co-expression Network