RNA id: TU14253



Basic Information


Item Value
RNA id TU14253
length 259
lncRNA type inter_gene
GC content 0.42
exon number 1
gene id G10561
representative True

Chromosome Information


Item Value
chromosome id NC_035898.1
NCBI id CM008301.1
chromosome length 34292151
location 14306272 ~ 14306530 (-)
genome version Astyanax_mexicanus-2.0_2017_mexican_tetra_Genome
species mexican tetra
(Astyanax mexicanus)

Sequence


gcaaacaactacaaaaaaacaaggcaaggagaatataaaactagaacaaagactaagaaacacagactactAAACTAAGACTAGGATACATACGGACAGCAAGGATACGAACGGACAGCGAGGATACAGAGGAtacaaaagatacaaaagactcaacactgaacattcaaacagaggggcttaaatacaagaggagagtgagaaacacctgggctaggatgacaagggggcggggttatagacaagacacaggtgagaa

Function


GO: NA

KEGG: NA

JBrowse2


Neighbor


RNA id RNA type direction distance location representative gene id
TU14077 lncRNA downstream 263749 14041103 ~ 14042523 (-) False LOC103034594
TU14078 lncRNA downstream 265238 14038914 ~ 14041034 (-) False LOC103034594
TU14081 lncRNA downstream 284383 14021687 ~ 14021889 (-) True G10430
TU14080 lncRNA downstream 295859 14010176 ~ 14010413 (-) True G10429
TU14064 lncRNA downstream 388434 13917124 ~ 13917838 (-) True G10413
TU14294 lncRNA upstream 386252 14692782 ~ 14694894 (-) True G10595
TU14368 lncRNA upstream 400803 14707333 ~ 14708613 (-) True G10649
TU14375 lncRNA upstream 464800 14771330 ~ 14771618 (-) True G10654
TU14377 lncRNA upstream 488141 14794671 ~ 14797643 (-) False LOC103040656
TU14523 lncRNA upstream 654302 14960832 ~ 14970066 (-) True LOC103043825
XM_022674092.1 mRNA downstream 14110 14248674 ~ 14292162 (-) False LOC103039514
XM_022674098.1 mRNA downstream 14110 14248674 ~ 14292162 (-) False LOC103039514
XM_022674124.1 mRNA downstream 14110 14248674 ~ 14292162 (-) False LOC103039514
XM_022674117.1 mRNA downstream 14110 14248674 ~ 14292162 (-) False LOC103039514
XM_022674106.1 mRNA downstream 14110 14248674 ~ 14292162 (-) False LOC103039514
XM_022674133.1 mRNA upstream 24472 14331002 ~ 14333447 (-) True LOC111193418
XM_007251032.3 mRNA upstream 35390 14341920 ~ 14350288 (-) True armc5
XM_007251030.3 mRNA upstream 47822 14354352 ~ 14360091 (-) True LOC103037078
XM_007251029.2 mRNA upstream 55104 14361634 ~ 14371508 (-) True LOC103036770
XM_007251033.3 mRNA upstream 77704 14384234 ~ 14398697 (-) True arl6ip1
TU14251 other downstream 62478 14241061 ~ 14243794 (-) True G10560
TU13662 other downstream 1489086 12813025 ~ 12817186 (-) True G10089
TU13252 other downstream 2628559 11677178 ~ 11677713 (-) False LOC103022087
TU13065 other downstream 2962010 11340140 ~ 11344262 (-) True G9632
TU12844 other downstream 3910792 10393462 ~ 10395480 (-) True G9469
TU14289 other upstream 312866 14619396 ~ 14656528 (-) False hsd3b7
TU14530 other upstream 616435 14922965 ~ 14923959 (-) True G10767
TU14606 other upstream 966225 15272755 ~ 15278437 (-) True G10808
TU14624 other upstream 979315 15285845 ~ 15286735 (-) False LOC111188178
XR_002650886.1 other upstream 1455817 15762347 ~ 15902433 (-) False LOC103030038

Expression Profile