G207768


Basic Information

Item Value
gene id G207768
gene name NA
gene type non-coding
species mexican tetra (Astyanax mexicanus)
category of species ornamental fish

Chromosome Information

Item Value
chromosome id NC_035920.1
NCBI id CM008323.1
chromosome length 47266144
location 24897302 ~ 24946528 (-)
genome version Astyanax_mexicanus-2.0_2017_mexican_tetra_Genome

Sequence

>TU281974
ATACACAAGTACCCTCGTTGGAGATTTTTTAGTTATCAACCGAGTTGGATAAACTTTTGCGCTGTTTGATTGAGGGAGACTCCGGTTGTTTTAATAGACGGGAGAAACGAGTGAACTTGTCAAATCCAAGATGGCGAGCCAACCCTGAAACTACGATCCCCAGAATCCTATGCGAGCGTTTTCCCGCCACCCGAGCCCCAACGGCGCCTCGAGGAGGGAAACAGATAAGAGGAGCAGAGTCA
>TU281975
ATACACAAGTACCCTCGTTGGAGATTTTTTAGTTATCAACCGAGTTGGATAAACTTTTGCGCTGTTTGATTGAGGGAGACTCCGGTTGTTTTAATAGACGGGAGAAACGAGTGAACTTGTCAAATCCAAGATGGCGAGCCAACCCTGAAACTACGATCCCCAGAATCCTATGCGAGCGTTTTCCCGCCACCCGAGCCCCAACGGCGCCTCGAGGAGGGAAACAGATAAGAGGAGCAGAGacacacacacacacacacacacacacacacacacc

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU281974 False 242 lncRNA 0.49 2 24945964 24946528
TU281975 True 274 lncRNA 0.50 3 24897302 24946528

Neighbor

gene id symbol gene type direction distance location
LOC103044011 NA coding downstream 66339 24813330 ~ 24830963 (-)
LOC111195752 LOC108428077 coding downstream 109279 24779413 ~ 24788023 (-)
LOC103042272 zgc:86725,actc1,LOC105902989,LOC108428114,LOC108269395,LOC105895662,LOC106561611,LOC105018274 coding downstream 123151 24757231 ~ 24774151 (-)
LOC103031505 shank2,LOC108411910,LOC107572162 coding downstream 150306 24532648 ~ 24746996 (-)
ciapin1 ciapin1,LOC107735894,LOC107682982,LOC106904989,LOC107577787 coding downstream 382572 24508237 ~ 24514730 (-)
c24h11orf49 cunh11orf49,c8h11orf49,zgc:92873,LOC107707434 coding upstream 197463 25143991 ~ 25150989 (-)
drc7 NA coding upstream 266037 25212565 ~ 25231011 (-)
ccdc113 NA coding upstream 323613 25270141 ~ 25277760 (-)
LOC103040081 snrkb,LOC108413384,LOC108268812,LOC107674965,LOC107589179,LOC107571964,LOC107714071 coding upstream 465658 25412186 ~ 25452091 (-)
znrf1 znrf1,LOC107589180,LOC107714072 coding upstream 549773 25496301 ~ 25572271 (-)
G207767 NA non-coding downstream 5039 24891733 ~ 24892263 (-)
G207763 NA non-coding downstream 84350 24812654 ~ 24812952 (-)
G207706 NA non-coding downstream 319696 24530725 ~ 24577606 (-)
G207705 coq9,LOC107707431,LOC107099699,LOC107589199 non-coding downstream 376553 24517463 ~ 24520749 (-)
G207702 LOC108411915 non-coding downstream 389359 24506149 ~ 24507943 (-)
G207781 NA non-coding upstream 16044 24962572 ~ 25045617 (-)
G207881 ckap5,LOC108269026 non-coding upstream 207100 25153628 ~ 25166678 (-)
G207874 ckap5,LOC108269026 non-coding upstream 244709 25191237 ~ 25193673 (-)
G207886 csnk2a2,csnk2a2b,LOC106573643 non-coding upstream 332837 25279365 ~ 25299692 (-)
G207926 NA non-coding upstream 483476 25430004 ~ 25430323 (-)
G207707 polr2c other downstream 368235 24524734 ~ 24529067 (-)
dnajc24 dnajc24 other downstream 876988 23938925 ~ 24020314 (-)
LOC103033401 spon1b,LOC108413171,LOC107701107,LOC108269023,LOC107745929,LOC107686649 other downstream 1484348 23220469 ~ 23412954 (-)
LOC103035944 mical3 other downstream 1941278 22885432 ~ 22956024 (-)
LOC111195740 vma21,LOC108436707,LOC106604103 other downstream 2914572 21979799 ~ 21982730 (-)
G207772 NA other upstream 1603 24948131 ~ 24948851 (-)
usb1 NA other upstream 304707 25251235 ~ 25260167 (-)
G207903 NA other upstream 370474 25317002 ~ 25352674 (-)
G207940 NA other upstream 646103 25592631 ~ 25733304 (-)
LOC111195756 NA other upstream 972692 25919220 ~ 25938032 (-)

Expression


Co-expression Network