G50881


Basic Information

Item Value
gene id G50881
gene name NA
gene type non-coding
species grasscarp (Ctenopharyngodon idella)
category of species economic fish

Chromosome Information

Item Value
chromosome id CI01000009
NCBI id null
chromosome length 16003125
location 623734 ~ 623957 (+)
genome version v1_2015/06_NatureGenetics_grasscarp_Genome

Sequence

>TU57903
GAATTTTCAGCATCATTATTCCAGTCTTCAGTGTCACATGATCCTTCAGAAATCATTCTAATATGCTGACTTTGGTGCTTTTTTTTTTTATATAAATAGAACATTAAAAAACAGCATTTATTTTAAATAGAAATCATTTGTAACAATATGCATGCATTTACTGTCACTTTTGATCAATTTAATGCACCTTTTCTGAATAAAAGTATTAATTTCTTTCAAACCCG

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU57903 True 224 lncRNA 0.27 1 623734 623957

Neighbor

gene id symbol gene type direction distance location
CI01000009_00620687_00621072 NA coding upstream 2197 620687 ~ 621537 (+)
CI01000009_00611583_00617762 TFG coding upstream 5972 611305 ~ 617762 (+)
CI01000009_00608513_00609159 JAGN1, JAGN1A, JGN1A coding upstream 14359 608513 ~ 609375 (+)
CI01000009_00605366_00605964 COL8A1, COL8A1A coding upstream 17664 605366 ~ 606070 (+)
CI01000009_00603498_00605392 NA coding upstream 18342 603228 ~ 605392 (+)
CI01000009_00704243_00710805 NA coding downstream 80108 704065 ~ 710805 (+)
CI01000009_00719164_00724772 SRPX coding downstream 95207 719164 ~ 725051 (+)
CI01000009_00805606_00808374 NA coding downstream 180947 804904 ~ 808404 (+)
CI01000009_00852319_00853083 CX45.6 coding downstream 227285 851242 ~ 853461 (+)
CI01000009_00913995_00916434 COMMD6 coding downstream 290038 913995 ~ 916565 (+)
G50855 NA non-coding upstream 33121 590132 ~ 590613 (+)
G50735 NA non-coding upstream 85223 538171 ~ 538511 (+)
G50719 NA non-coding upstream 119115 504418 ~ 504619 (+)
G50631 NA non-coding upstream 127773 395375 ~ 495961 (+)
G50633 NA non-coding upstream 234612 388750 ~ 389122 (+)
G50883 NA non-coding downstream 12517 636474 ~ 636705 (+)
G50880 NA non-coding downstream 20828 644785 ~ 645049 (+)
G50878 NA non-coding downstream 70069 694026 ~ 695215 (+)
G50902 NA non-coding downstream 73648 697605 ~ 697840 (+)
G50876 NA non-coding downstream 103116 727073 ~ 728482 (+)
CI01000009_00094836_00095813 NA other upstream 527947 94371 ~ 97230 (+)
G50920 NA other downstream 145884 769841 ~ 770233 (+)
CI01000009_01431700_01434463 NA other downstream 798890 1429873 ~ 1435328 (+)
G51122 NA other downstream 1056189 1680146 ~ 1681966 (+)
CI01000009_01897343_01919208 PIKFYVE other downstream 1270278 1897343 ~ 1919516 (+)
G51274 NA other downstream 1631142 2255099 ~ 2350486 (+)

Expression


Co-expression Network