CI01000009_01431700_01434463


Basic Information

Item Value
gene id CI01000009_01431700_01434463
gene name NA
gene type misc
species grasscarp (Ctenopharyngodon idella)
category of species economic fish

Chromosome Information

Item Value
chromosome id CI01000009
NCBI id null
chromosome length 16003125
location 1429873 ~ 1435328 (+)
genome version v1_2015/06_NatureGenetics_grasscarp_Genome

Sequence

>CI01000009_01431700_01434463.mRNA
GCATAAAATGACATAAATGTTAGAATAGCCAGGGTCTTAACGCCAAGTGACCTTAGTTTGCTCTGTTTTTGCTTCCCAGTTCAACAAGTATGAAATTAGCATTGTGGCAAACGTTGTACAAAATGAGGCAAGCACAGCTTTTGAAAGTGAAGTTGTCAAACTGTTAGTACAATGGAAAGTATTTCAGTATGGAAAGTCACCGGCTTAAAAAGTTATTCATATAATGAAAGGAATTTTCCCAAAGGCCTAGCAGTAACGACTGCCAGAGTTTGTCTGCCACAAAATACCATGATATTGAGTCTGATACACTTATATGTTTATGTCTTTATATTTAATTCATAGTAGCATGAGCATCCATGTGTCTTCTATGGTTAATGCATACTTTAGATTGTTCTGTCAAGTGTAAGTGTGCTTTGAAGCTTATCTAATCAAACTGAAGATATGTTTCCACTTGTATGAAGTCTAGACTTGTTCAATATCTATCTATCTATCTATCTATCTGTCTATCTATTTACCATATTTGTTTTAAAAATACAGTTATATGAAATCTGTTACATTTCAATTTATTATTTCTACTGTCTTATATTGAAATTCAAATTGCAATTCTACACCCTATTTGCTACCTCAATTCAAATTCAATGATTGACTTTAAACGGCATTCTCAATTTAATACTGAATGGTGCACAACCCTAATGGAGACACCTGTTGTCTGCAGCTGCAGTCTTTGGCCGATGGCCCGACTTCTAGGTTAATTTGGTCTGGCTTCCCACATCTTAACCAAGTGTGCCATCCAACCTCCCAGCAGTCTAAAGGGAACCTGGACTCAGGTCAAGCCCTCAGCAGTTTAGTAATGGAAATCCTCACCGCTGCTCTTGATGTTGATGTTAAAAAGGCCATTTTCATCTATTGTCCAGAGAAAAGCAGGAGGAAAGGACTCTCTGTAGCTGTAAATAACTGTAAACATCCAGCGAGGCTGAGGGGAGTTAGGCTGGCTGAGGTGACTGACAGCTTCCCTGGCCCTGTTGTGCCTGGCAGATGTGGAGGTGTCATAGTAGTGATGAATTGTTTACACTCACCTGTCTGCCACGTCCTTCAGCGTCAGGGGGATAGGCCCGGGCGACGGGAAAGGTTTGGCGGCACTGCCACAGGGTCAACAATATCTTCAGTGTTACCGGTGAGCACTGAATGGCTTGTGTCCTACGGCGTAATTAAATTCTTTTGTGAGGACGGAAGTGTTTTTGCAAATGGAGTGTATTTTGCACAACTTTTCATATTCCCGCTGAGAAAATTAGCATGTTAATGAGCACGTTGTTTACTCCAAAAATGTGAGGGAGATTTTTGTTCTCTTATATTTCTCCATGCTCATACAATATTAAAAA

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
CI01000009_01431700_01434463.mRNA False 1379 mRNA 0.40 3 1430850 1434542

Neighbor

gene id symbol gene type direction distance location
CI01000009_01402330_01407372 ZIC2A, ZIC2 coding upstream 23095 1401061 ~ 1407755 (+)
CI01000009_01351236_01380055 CLYBL coding upstream 50565 1351236 ~ 1380285 (+)
CI01000009_01219880_01224537 NA coding upstream 205981 1219637 ~ 1224869 (+)
CI01000009_01183737_01206031 NA coding upstream 223993 1182091 ~ 1206857 (+)
CI01000009_01110684_01111118 NA coding upstream 319249 1110684 ~ 1111601 (+)
CI01000009_01454610_01484907 NA coding downstream 19682 1453708 ~ 1485828 (+)
CI01000009_01570544_01595199 NA coding downstream 135537 1570079 ~ 1595466 (+)
CI01000009_01692563_01725364 ITGBL1 coding downstream 258021 1692563 ~ 1725364 (+)
CI01000009_01733394_01738937 ITGBL1 coding downstream 296752 1731294 ~ 1739468 (+)
CI01000009_01892219_01893628 NA coding downstream 457677 1892219 ~ 1893754 (+)
G51059 NA non-coding upstream 78427 1352013 ~ 1352423 (+)
G51043 NA non-coding upstream 126782 1303599 ~ 1304068 (+)
G51041 NA non-coding upstream 140074 1290543 ~ 1290776 (+)
G51039 NA non-coding upstream 142178 1288200 ~ 1288672 (+)
G51036 NA non-coding upstream 145430 1284860 ~ 1285420 (+)
G50937 NA non-coding downstream 12053 1446595 ~ 1480466 (+)
G51062 NA non-coding downstream 48176 1482718 ~ 1482952 (+)
G51110 NA non-coding downstream 222517 1657059 ~ 1657370 (+)
G51125 NA non-coding downstream 306070 1740612 ~ 1863136 (+)
G50920 NA other upstream 660617 769841 ~ 770233 (+)
CI01000009_00094836_00095813 NA other upstream 1335063 94371 ~ 97230 (+)
G51122 NA other downstream 245604 1680146 ~ 1681966 (+)
CI01000009_01897343_01919208 PIKFYVE other downstream 459693 1897343 ~ 1919516 (+)
G51274 NA other downstream 820557 2255099 ~ 2350486 (+)
G51529 NA other downstream 1627491 3062033 ~ 3062587 (+)
CI01000009_03202999_03207060 MPC2, MPC2.S other downstream 1768230 3202207 ~ 3208984 (+)
CI01000009_01034561_01035452 KLF12 coding upstream 364588 1034561 ~ 1035728 (+)

Expression


Co-expression Network