CI01000009_01351236_01380055 (CLYBL)


Basic Information

Item Value
gene id CI01000009_01351236_01380055
gene name CLYBL
gene type coding
species grasscarp (Ctenopharyngodon idella)
category of species economic fish

Chromosome Information

Item Value
chromosome id CI01000009
NCBI id null
chromosome length 16003125
location 1351236 ~ 1380285 (+)
genome version v1_2015/06_NatureGenetics_grasscarp_Genome

Sequence

>CI01000009_01351236_01380055.mRNA
GGGGATAAGTCGTCTACTTTTGTCTGCGGTTCCCCGGTGTCAGTCTAGCCAGCGTTCCCACCACACCCCTGGCACCTCTCTGAAGTACATACCACGCCGCGCCGTGCTATACGTTCCCGGCAACGACGAGAGAAAACTGCAAAAACTAACTTCACTGGACGTGGACTGCGCTGTTCTTGACTGTGAAGATGGAGTCGCCCTTAACAAGAAGGTCATTGCAAGAAGAAACTGGGAGGAAGCTCGGAAAACCATCCCAAAGATGCTGGCCAATCTGGATCTGGGGCGTACGGAGAAGTGCGTACGGTTGAACTCTGTGTCTAGTGGCCTGGCCGAAGCAGACATGGCGGTTATTTTACAGGCGGACATGCTGCCCACAGCTCTCATGCTGCCAAAGGTGGAAAACACAGGAGAGGTTCAGTGGGAGGTGTTGAGGATTCTTCTAGACGTTTGTTCGTCCATCAAAGCAGGGCTTCCTCTGCCAGTCGGCCCCAGGAGGCCCCTGACAATTCTCCCACAGATTCGGAGCTGTGCGCATTCTTTGGCCGCCACACTACTGAGTCCTGAAAGGAACCAGCTCGAGTCCCGTCCCTCCCCGTCCGCTCCTAATTCTCCCCCCTCCACCACTACCACCACACGAGAATTAATTGAAACTTATCCACTTGCCGCCTTTTTCGCTCTAGCGGCTCCCTCGCCCCAAAATCCCTGCCTCGTTTCCATCCGGATCATGGCGGATGGGGCCGCCGTGGCACTTGTTGTCGAGAAGTGTGGGTTTTCACAAGAGGCCTATAGCAACCGGAAAAGCTTGTCACCTGAGAGTGGTATTAGCGTTTGCACAAGTGCGTTTGTTGACAGGTTTCAGCGGTACTTAAAAGGCAGAGAGCTTGAGGAACCCATCCGCTTGGTCACCTTTGTGGAAACTGCTGTGGGTCTGCTGAATTTTAAGGTAGTGTGTGAAGCACTTCGAGATCTTGGTCCAAAGGCAGGTCTTCATCATGATGGAGTTGTCTTTGGGTCAGATGACTTCTGTGCCAGCATAGGAGCCACACGCACTAAAGAAGCTAAAGAAGTCCTGTACGCTCGGCAGAAAGTGGTGGTCACCACCAAAGCGTTCGGTCTCCAGGCGATCGACCTTGTTTACATCGACTATCAGGATGTGGATGGACTGAGGCAGCAGGCCAGAGAGGGCGCGCTCATGGGTTTCACTGGAAAACAAGTGATTCACCCCAACCAGATCAAGGCTGTTCAAGAGGAATTTGCCCCCAGTCCAGAGAGAATCAAGTGGGCCACGGAGCTGATCGCTGCATTCGAGGAGCATCAGAAGTTGGGAAAGGGGGCTTTCACCTTTCATGGCAGTATGATTGACATGCCATCTCTGAAGCAGGCTCAGAACATTGTCACAATGGCTTCAGCTGTTCAAGGAAAGGGACTCAGCAAGCCAGTTTGTTCTTCAAGACAAGGCTTGAATGTGCCTGCAGCCTGGCGTAAGCTCTACGCGGCGTGCCACACGCTCGCTCGCAAACACGTACACAAAGAGCTCCACGAGGGTTCTCTCTATGTAAATATCAGCAGTTTTCCATGGCTTTGTTACCCGGTCAGTGGTTCCCATCTCTCCATCCAGCTTCGGAGTCTCCGTGAACATGGCCAAGATGTGCCGCCGTTGTCTATTTCACCAGTGTTCCTCACACACACTTTGTCAAGAATGCCTCTTTTGAAATAAAACTTTAGGGTGTCATTCCCAATGAATGACCATCCTTTCCACCCTTGAGGGCATTGTTGTTGTTGTTTATGTCGTGTTTGTCGTGAATACATCCTGCAGTACGCTATGTTCCCGCTCCTTCCTGCTGGTCTCCCACGAGCTGGTGAGATATTTGGCAGAAATGTCTAGGGCGGATTTGTCTGGGATGGGGGTGGGGGGAATGGTTGATGGTTCAGTTGGTCACTATGGTA

Function

symbol description
clybl Predicted to enable (S)-citramalyl-CoA lyase activity. Predicted to be involved in regulation of cobalamin metabolic process. Is expressed in brain. Orthologous to human CLYBL (citramalyl-CoA lyase).

GO:

id name namespace
GO:0003824 catalytic activity molecular_function

KEGG:

id description
K11390 CLYBL; citrate lyase subunit beta-like protein

RNA

RNA id representative length rna type GC content exon number start site end site
CI01000009_01351236_01380055.mRNA True 1947 mRNA 0.52 12 1351236 1380285

Neighbor

gene id symbol gene type direction distance location
CI01000009_01219880_01224537 NA coding upstream 126367 1219637 ~ 1224869 (+)
CI01000009_01183737_01206031 NA coding upstream 144379 1182091 ~ 1206857 (+)
CI01000009_01110684_01111118 NA coding upstream 239635 1110684 ~ 1111601 (+)
CI01000009_01034561_01035452 KLF12 coding upstream 315508 1034561 ~ 1035728 (+)
CI01000009_00920570_00955979 TBC1D4 coding upstream 394662 920428 ~ 956574 (+)
CI01000009_01402330_01407372 ZIC2A, ZIC2 coding downstream 20776 1401061 ~ 1407755 (+)
CI01000009_01431700_01434463 NA coding downstream 50565 1429873 ~ 1435328 (+)
CI01000009_01454610_01484907 NA coding downstream 73939 1453708 ~ 1485828 (+)
CI01000009_01570544_01595199 NA coding downstream 189794 1570079 ~ 1595466 (+)
CI01000009_01692563_01725364 ITGBL1 coding downstream 312278 1692563 ~ 1725364 (+)
G51043 NA non-coding upstream 47168 1303599 ~ 1304068 (+)
G51041 NA non-coding upstream 60460 1290543 ~ 1290776 (+)
G51039 NA non-coding upstream 62564 1288200 ~ 1288672 (+)
G51036 NA non-coding upstream 65816 1284860 ~ 1285420 (+)
G50961 NA non-coding upstream 134007 1211550 ~ 1217229 (+)
G50937 NA non-coding downstream 66310 1446595 ~ 1480466 (+)
G51062 NA non-coding downstream 102433 1482718 ~ 1482952 (+)
G51110 NA non-coding downstream 276774 1657059 ~ 1657370 (+)
G50920 NA other upstream 581003 769841 ~ 770233 (+)
CI01000009_00094836_00095813 NA other upstream 1255449 94371 ~ 97230 (+)
G51122 NA other downstream 299861 1680146 ~ 1681966 (+)
CI01000009_01897343_01919208 PIKFYVE other downstream 513950 1897343 ~ 1919516 (+)
G51274 NA other downstream 874814 2255099 ~ 2350486 (+)
G51529 NA other downstream 1681748 3062033 ~ 3062587 (+)

Expression


Co-expression Network

Homologous

species gene id symbol gene type chromosome NCBI id location