G51110


Basic Information

Item Value
gene id G51110
gene name NA
gene type non-coding
species grasscarp (Ctenopharyngodon idella)
category of species economic fish

Chromosome Information

Item Value
chromosome id CI01000009
NCBI id null
chromosome length 16003125
location 1657059 ~ 1657370 (+)
genome version v1_2015/06_NatureGenetics_grasscarp_Genome

Sequence

>TU58221
GTAATAAAGAACTTTGAGCTTCAGAGTGTATTTGACAATGGTTATTCTATAGGTTCAGATTTTATGTATTCCAATTAGGGGTGTAACGATACACTAAAAGTTTCATTAAAAAATGAAACTGAAATTCAAATAACAGATTTCCGAAACATTAACAATTTTCAATAACTTTGTTTTATATATAGAACTTATAAGGTTAGTTCACCCAAAAATGTAAATTCTG

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU58221 True 220 lncRNA 0.50 2 1657059 1657370

Neighbor

gene id symbol gene type direction distance location
CI01000009_01570544_01595199 NA coding upstream 61593 1570079 ~ 1595466 (+)
CI01000009_01454610_01484907 NA coding upstream 171231 1453708 ~ 1485828 (+)
CI01000009_01431700_01434463 NA coding upstream 222517 1429873 ~ 1435328 (+)
CI01000009_01402330_01407372 ZIC2A, ZIC2 coding upstream 249304 1401061 ~ 1407755 (+)
CI01000009_01351236_01380055 CLYBL coding upstream 276774 1351236 ~ 1380285 (+)
CI01000009_01692563_01725364 ITGBL1 coding downstream 35193 1692563 ~ 1725364 (+)
CI01000009_01733394_01738937 ITGBL1 coding downstream 73924 1731294 ~ 1739468 (+)
CI01000009_01892219_01893628 NA coding downstream 234849 1892219 ~ 1893754 (+)
CI01000009_01897343_01919208 PIKFYVE coding downstream 239973 1897343 ~ 1919516 (+)
CI01000009_01966898_01976924 COQ10B coding downstream 309528 1966898 ~ 1977734 (+)
G51062 NA non-coding upstream 174107 1482718 ~ 1482952 (+)
G50937 NA non-coding upstream 176593 1446595 ~ 1480466 (+)
G51059 NA non-coding upstream 304636 1352013 ~ 1352423 (+)
G51125 NA non-coding downstream 83242 1740612 ~ 1863136 (+)
G51188 NA non-coding downstream 192457 1849827 ~ 1854511 (+)
G51193 NA non-coding downstream 208074 1865444 ~ 1865801 (+)
G51194 NA non-coding downstream 212272 1869642 ~ 1869855 (+)
G51195 NA non-coding downstream 218612 1875982 ~ 1876208 (+)
G50920 NA other upstream 886826 769841 ~ 770233 (+)
CI01000009_00094836_00095813 NA other upstream 1561272 94371 ~ 97230 (+)
G51122 NA other downstream 22776 1680146 ~ 1681966 (+)
G51274 NA other downstream 597729 2255099 ~ 2350486 (+)
G51529 NA other downstream 1404663 3062033 ~ 3062587 (+)
CI01000009_03202999_03207060 MPC2, MPC2.S other downstream 1545402 3202207 ~ 3208984 (+)

Expression


Co-expression Network