G50920


Basic Information

Item Value
gene id G50920
gene name NA
gene type unknown
species grasscarp (Ctenopharyngodon idella)
category of species economic fish

Chromosome Information

Item Value
chromosome id CI01000009
NCBI id null
chromosome length 16003125
location 769841 ~ 770233 (+)
genome version v1_2015/06_NatureGenetics_grasscarp_Genome

Sequence

>TU57948
CTACATTGCAACACACTGCTTCCTCTATCTCATTTCTTTCACGAATGGAGGCGTCTGCCAGGGGTATCGCCTTGGATTCTAAGAACAGTGCAGTTCGGTTACACACTCCAGTTCTGTCGCAATCCCCCCCGTTTCAACGGGGTTCTTCTGACTCTAGTGAACAGCGTGTCAGAGGCTTCTGTGCTACAGCGGGAGCTATCTTCCCTCCTCCTCAAGGGGGCAATAGAAGAAGTTCCTCCAGTGGAAGTGGAACGCGGCTTTTTCAGCCGCTACTTTCTAGTTCTGAAGAAGGACGGCGGTCTGCGCCCTATACTAGACCTCCATTGTCTGAACTTCTCCCTTTACAAAGGGAAGTTCAGAATGTTGACGCTGAAGACTATCATGTCTCAAATT

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU57948 True 393 TUCP 0.43 1 769841 770233

Neighbor

gene id symbol gene type direction distance location
CI01000009_00719164_00724772 SRPX coding upstream 44790 719164 ~ 725051 (+)
CI01000009_00704243_00710805 NA coding upstream 59036 704065 ~ 710805 (+)
CI01000009_00620687_00621072 NA coding upstream 148304 620687 ~ 621537 (+)
CI01000009_00611583_00617762 TFG coding upstream 152079 611305 ~ 617762 (+)
CI01000009_00608513_00609159 JAGN1, JAGN1A, JGN1A coding upstream 160466 608513 ~ 609375 (+)
CI01000009_00805606_00808374 NA coding downstream 34671 804904 ~ 808404 (+)
CI01000009_00852319_00853083 CX45.6 coding downstream 81009 851242 ~ 853461 (+)
CI01000009_00913995_00916434 COMMD6 coding downstream 143762 913995 ~ 916565 (+)
CI01000009_00920570_00955979 TBC1D4 coding downstream 150195 920428 ~ 956574 (+)
CI01000009_01034561_01035452 KLF12 coding downstream 264328 1034561 ~ 1035728 (+)
G50917 NA non-coding upstream 9568 757122 ~ 760273 (+)
G50913 NA non-coding upstream 13670 746194 ~ 756171 (+)
G50911 NA non-coding upstream 24663 742001 ~ 745178 (+)
G50909 NA non-coding upstream 33816 735727 ~ 736025 (+)
G50879 NA non-coding upstream 40021 728863 ~ 729820 (+)
G50921 NA non-coding downstream 6051 776284 ~ 776509 (+)
G50973 NA non-coding downstream 16651 786884 ~ 787490 (+)
G50978 NA non-coding downstream 29394 799627 ~ 799859 (+)
G50984 NA non-coding downstream 67707 837940 ~ 840919 (+)
G50947 NA non-coding downstream 103869 874102 ~ 877421 (+)
CI01000009_00094836_00095813 NA other upstream 674054 94371 ~ 97230 (+)
CI01000009_01431700_01434463 NA other downstream 652614 1429873 ~ 1435328 (+)
G51122 NA other downstream 909913 1680146 ~ 1681966 (+)
CI01000009_01897343_01919208 PIKFYVE other downstream 1124002 1897343 ~ 1919516 (+)
G51274 NA other downstream 1484866 2255099 ~ 2350486 (+)
G51529 NA other downstream 2291800 3062033 ~ 3062587 (+)

Expression


Co-expression Network