G37667 (LOC103035736,LOC108431365,LOC105007721,LOC103369715)


Basic Information

Item Value
gene id G37667
gene name LOC103035736,LOC108431365,LOC105007721,LOC103369715
gene type non-coding
species mexican tetra (Astyanax mexicanus)
category of species ornamental fish

Chromosome Information

Item Value
chromosome id NC_035900.1
NCBI id CM008303.1
chromosome length 25652880
location 18814821 ~ 18824187 (-)
genome version Astyanax_mexicanus-2.0_2017_mexican_tetra_Genome

Sequence

>TU50815
tttatatttaagtacttcaacttaagtgtggagcttaaataacaattcaacttctactcaagtcactttacagtactttatacatgtctgctgatatataactgtatataaacatgaataaaatatatttcggCAAAATTAAGCTATTTCTAGGCTATTTTAATTTACCTGAAATAAAGTTAGTGTAGAGTGAAGCTACAGAagtctgagtgagtgagtgagtgcgtgagttagtgagtgtgggtgtgttttttaCCTGGGTGGTGCATGAGGGCTCGTTTCCGGTACGCTTTCTTTATCTCATCCTCTGTTGCAGCCTTGTTGACTCCGAGGACCTTATAGTAgtcttttcttttgcttttctttAGTTCTAACTGAGCGGTCTTCAACAGAGTTTTATGTTctTTCGTCTTTTCTGTATGGTAGACTTTCTCGTAGTCCCGAACAGCTTCCTCATACTGCTCCATGTCCATATAGCACTGAGCTCTCCTCAGATATGCTTTAATGTAGCTCTCGTCTAGTTTGATGGCACTGCTGCAGTCCTCAATGGCCTGCTCCCGTTTATTTAGCTTGACTCCGGCTGTGGCTCTGTTGCAGTAGAGCTTGGCGTTTGTTTTGATGTTGTTTGGGTCGATGGTCAGGGCCTCTGAGTACAGCTGATATGCAGCATCATAATCACGATCCTTAAAGGCATTATTACCCTCTTCTTTCTTCGCCTTCAGAGCTTTAGCATTTCTGCAGGCTAATCGAGCTTTCTCGTGATCGGGTGCCATGCGCAGGGCCTGGATGAAAAACTGAACGGCCTTCTCAATGCAGTCCTCGTAATAAAGGCACAGACCTCGCACATAGAGGGCATCAGCATTAGTGGAGTCCATTCTGAGGATATCACTGGCAACGGACTGGGCTTCAGGGTATCTTCCCAGCAAAGCCAAACACTCTGCCTTCATGATTTTGAATTTATGACAGGCTCCAGCAAACTCCAGCGCCCGGTCCATGCAAAAAACCACCTTTCTGAAATCCCTCTTCTCAAATCCAAACTCAGCCATTTTCTCGTACTCCAACAGAGCTGCTGCATTCttatgCTCCTGTAAGGCCTGAGTGTTGGTGGGATCCAATTCCAGGACCTTCTGAAAGCAGCGGCTGGCAGCCATGGCATTACCTAACGACAGATGGCACTTTCCTTCTCTTAGATGGCCTTTCGTGAAGCATTCGTCAAGTCGCACAGCCTGCTGGGAGTCCTCCAGCGCCTCCCGAAAACGGCTCAGCATCATCAGGGTGGCAGCGCGGTTACCGTAATAACTGGCATTCTTAGGGCTCGCATCAATGGCCTTTGTGTAGTAATTGAAGGCTTCTGAGTAGTCTTTCTTAACGTAAAAGGCATTTCCCTTCTCCTTGAAAGTTTCCGCCTCCCTCTCCAGATCCTCCGGCTCCGTGATCATACTCTCCGGTTCCCCAGGCAGATCACACTCCACAGCTGCCATGTTGATCTTCTCAGGG

Function

NR:

description
dnaJ homolog subfamily C member 7-like isoform X1

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU50815 True 1497 lncRNA 0.46 11 18814821 18824187

Neighbor

gene id symbol gene type direction distance location
LOC103034677 NA coding downstream 302736 18503640 ~ 18512085 (-)
LOC103047794 mapt,LOC108274153,LOC108441162 coding downstream 316465 18452946 ~ 18498356 (-)
LOC111192385 NA coding downstream 337700 18474987 ~ 18477121 (-)
LOC103033508 si:ch211-255p10.4,brsk1,LOC108441159,LOC107598587,LOC108247084,LOC103033508,LOC107557374,LOC108274928,LOC107654020,LOC107658484 coding downstream 404903 18388678 ~ 18409918 (-)
LOC103033182 LOC108441158,LOC108273897,LOC107664611,LOC107708947 coding downstream 430416 18360572 ~ 18384405 (-)
LOC107197613 LOC108429207,LOC108429768 coding upstream 238670 19062857 ~ 19124736 (-)
LOC103043551 LOC108444285,LOC108273949 coding upstream 455799 19279986 ~ 19291010 (-)
LOC111192386 rac3b,rac3,LOC100712409,LOC107571767,LOC108444292,LOC106535622,LOC106610298 coding upstream 506480 19330667 ~ 19340948 (-)
lrrc45 lrrc45 coding upstream 517842 19342029 ~ 19353789 (-)
LOC103038385 prkar1ab,LOC103038385,LOC108444289,LOC107693667,LOC107708993,LOC107602422,LOC108274040 coding upstream 598713 19422900 ~ 19436284 (-)
G37645 NA non-coding downstream 40478 18709453 ~ 18774343 (-)
G37643 LOC103035226,LOC108274320,LOC108431395,LOC104923118,LOC102233132 non-coding downstream 101377 18711611 ~ 18713444 (-)
G37612 plekhm1 non-coding downstream 194446 18615222 ~ 18620375 (-)
G37609 NA non-coding downstream 209172 18598257 ~ 18605649 (-)
G37606 scn4a,LOC108435052,LOC107654028 non-coding downstream 227343 18581426 ~ 18587478 (-)
G37669 LOC108431393,LOC103369716 non-coding upstream 13581 18837768 ~ 18846662 (-)
G37671 NA non-coding upstream 35852 18860039 ~ 18862511 (-)
G37668 NA non-coding upstream 39989 18864176 ~ 18865557 (-)
G37676 NA non-coding upstream 41723 18865910 ~ 18866119 (-)
G37677 NA non-coding upstream 44941 18869128 ~ 18907968 (-)
G37616 NA other downstream 179723 18633578 ~ 18635098 (-)
G37603 NA other downstream 241645 18572691 ~ 18573176 (-)
LOC103047479 LOC108441156 other downstream 496864 18282490 ~ 18317957 (-)
vps25 vps25 other downstream 1018833 17789951 ~ 17795988 (-)
cntd1 NA other downstream 1109798 17692497 ~ 17705023 (-)
LOC103045068 antxrl,antxr1c,LOC108437311,LOC105893913,LOC106589351,LOC107720085 other upstream 720038 19544225 ~ 19601284 (-)
c4h10orf128 NA other upstream 994081 19818268 ~ 19825652 (-)
slc39a11 slc39a11,s39ab,LOC107653972,LOC107693650 other upstream 1687484 20511671 ~ 20679431 (-)
G38338 g6pc,g6pca.2,LOC107682718 other upstream 3049133 21873320 ~ 21878377 (-)
a1cf a1cf,LOC107654048 other upstream 3189318 22013505 ~ 22038504 (-)

Expression


Co-expression Network

Homologous

species gene id symbol gene type chromosome NCBI id location
grasscarp (Ctenopharyngodon idella) CI01000034_05281481_05288563 NA coding CI01000034 null 5281357 ~ 5288580 (-)