G37603


Basic Information

Item Value
gene id G37603
gene name NA
gene type unknown
species mexican tetra (Astyanax mexicanus)
category of species ornamental fish

Chromosome Information

Item Value
chromosome id NC_035900.1
NCBI id CM008303.1
chromosome length 25652880
location 18572691 ~ 18573176 (-)
genome version Astyanax_mexicanus-2.0_2017_mexican_tetra_Genome

Sequence

>TU50696
CTCTTATTTACATTCTTTTCCCCTTCTTCATCTGAAGAATCATCCGTCTCCTCGTCATCTTCAACATCGGTCTCTCCCTTAGCGATGGGCACGTTCAGGGTTGAAGACTCCAGACAGTTGCTCAAGCCGTCGGCCAACTTCCCTCCATCGAGGTGGTTCAACATCAAGAGCCTCCTTGTTCTTATCTCCCTCATcacctccatcatcatcattcggAGGCTTCCTGCCCAGGATCTGCCGAATCAGGCCGACGATGAAGCCTTTGACCCAGTCTATTCCCCTGGTGATGCGCCCGATGGCGATCTGGAGATTGTTCATCTCACCATCGTCGTCACCTGCTGAGAGATTATCTCCACTAAACGAGCTGAGCAGCAAGGCAAGGAAGAGATTCAGCACCTGagagaagaaataaaacacaatgtaaAGGAGGTCACTTCCAATTTAAAGGCTTAGATTTGTCTTATTTAAAGtcctttgtttaataaa

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU50696 True 486 TUCP 0.47 1 18572691 18573176

Neighbor

gene id symbol gene type direction distance location
LOC103034677 NA coding downstream 60606 18503640 ~ 18512085 (-)
LOC103047794 mapt,LOC108274153,LOC108441162 coding downstream 74335 18452946 ~ 18498356 (-)
LOC111192385 NA coding downstream 95570 18474987 ~ 18477121 (-)
LOC103033508 si:ch211-255p10.4,brsk1,LOC108441159,LOC107598587,LOC108247084,LOC103033508,LOC107557374,LOC108274928,LOC107654020,LOC107658484 coding downstream 162773 18388678 ~ 18409918 (-)
LOC103033182 LOC108441158,LOC108273897,LOC107664611,LOC107708947 coding downstream 188286 18360572 ~ 18384405 (-)
LOC107197613 LOC108429207,LOC108429768 coding upstream 489681 19062857 ~ 19124736 (-)
LOC103043551 LOC108444285,LOC108273949 coding upstream 706810 19279986 ~ 19291010 (-)
LOC111192386 rac3b,rac3,LOC100712409,LOC107571767,LOC108444292,LOC106535622,LOC106610298 coding upstream 757491 19330667 ~ 19340948 (-)
lrrc45 lrrc45 coding upstream 768853 19342029 ~ 19353789 (-)
LOC103038385 prkar1ab,LOC103038385,LOC108444289,LOC107693667,LOC107708993,LOC107602422,LOC108274040 coding upstream 849724 19422900 ~ 19436284 (-)
G37602 LOC108244585,LOC108235708,LOC107390838 non-coding downstream 6673 18565664 ~ 18566018 (-)
G37601 NA non-coding downstream 7620 18564741 ~ 18565071 (-)
G37600 scn4aa,scn4a,LOC107598592,LOC107732174 non-coding downstream 9198 18563111 ~ 18563493 (-)
G37598 scn4a,LOC108435052 non-coding downstream 18087 18554349 ~ 18554604 (-)
G37597 scn4a non-coding downstream 22460 18548083 ~ 18550231 (-)
G37604 scn4aa,LOC105894041,LOC107654028,LOC107732174,LOC107598592,LOC108435052 non-coding upstream 5258 18578434 ~ 18578712 (-)
G37605 scn4a,LOC107664628,LOC107708946,LOC107654028,LOC107732174,LOC108435052 non-coding upstream 7709 18580885 ~ 18581316 (-)
G37606 scn4a,LOC108435052,LOC107654028 non-coding upstream 8250 18581426 ~ 18587478 (-)
G37609 NA non-coding upstream 25081 18598257 ~ 18605649 (-)
G37612 plekhm1 non-coding upstream 42046 18615222 ~ 18620375 (-)
LOC103047479 LOC108441156 other downstream 254734 18282490 ~ 18317957 (-)
vps25 vps25 other downstream 776703 17789951 ~ 17795988 (-)
cntd1 NA other downstream 867668 17692497 ~ 17705023 (-)
LOC103025753 LOC108425979,LOC108274047 other downstream 883307 17534703 ~ 17689384 (-)
LOC103025140 NA other downstream 1095813 17473910 ~ 17476878 (-)
G37616 NA other upstream 60402 18633578 ~ 18635098 (-)
LOC103045068 antxrl,antxr1c,LOC108437311,LOC105893913,LOC106589351,LOC107720085 other upstream 971049 19544225 ~ 19601284 (-)
c4h10orf128 NA other upstream 1245092 19818268 ~ 19825652 (-)
slc39a11 slc39a11,s39ab,LOC107653972,LOC107693650 other upstream 1938495 20511671 ~ 20679431 (-)
G38338 g6pc,g6pca.2,LOC107682718 other upstream 3300144 21873320 ~ 21878377 (-)

Expression


Co-expression Network