G38291


Basic Information

Item Value
gene id G38291
gene name NA
gene type non-coding
species mexican tetra (Astyanax mexicanus)
category of species ornamental fish

Chromosome Information

Item Value
chromosome id NC_035900.1
NCBI id CM008303.1
chromosome length 25652880
location 21583616 ~ 21608302 (-)
genome version Astyanax_mexicanus-2.0_2017_mexican_tetra_Genome

Sequence

>TU51638
taaccccgcccctgagggctgcctcgaggtcacaggctgcagagcggagcggagctgacggtctgttattggtcccgcccataaccagcccttttacaataaccacaccttttttgaatagagctgaataacgttttaaaaacgaattctgtggggatataaaaatatgacaatataagcagaggttacactagctgctgcatttaaataatggaggtagaattaca

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU51638 True 227 lncRNA 0.45 2 21583616 21608302

Neighbor

gene id symbol gene type direction distance location
LOC103040573 NA coding downstream 3849 21480761 ~ 21579767 (-)
LOC103039938 NA coding downstream 179059 21393788 ~ 21404557 (-)
LOC103036789 LOC108431390,LOC108274191,LOC107654041 coding downstream 192943 21361238 ~ 21390673 (-)
tbc1d12 tbc1d12 coding downstream 234196 21324428 ~ 21349420 (-)
noc3l noc3l coding downstream 263065 21296715 ~ 21320551 (-)
LOC103029147 LOC108443253 coding upstream 27788 21636090 ~ 21644027 (-)
LOC103032007 kat7,LOC108443263,LOC107708935,LOC107739754,LOC107598609,LOC107654043 coding upstream 219826 21828128 ~ 21841369 (-)
LOC103023948 LOC108443262 coding upstream 255187 21863489 ~ 21871502 (-)
aarsd1 aarsd1,LOC107739756,LOC107695514,LOC107708900 coding upstream 272740 21881042 ~ 21900740 (-)
LOC103046911 NA coding upstream 845485 22453787 ~ 22458181 (-)
G38257 NA non-coding downstream 224054 21359154 ~ 21359562 (-)
G38231 NA non-coding downstream 259456 21321709 ~ 21324160 (-)
G38252 NA non-coding downstream 266271 21317103 ~ 21317345 (-)
G38246 NA non-coding downstream 292412 21289848 ~ 21291204 (-)
G38239 plce1 non-coding downstream 304177 21264937 ~ 21279439 (-)
G38302 NA non-coding upstream 170350 21778652 ~ 21778910 (-)
G38342 NA non-coding upstream 231492 21839794 ~ 21840799 (-)
G38344 ptges3l,si:ch211-131k2.3,LOC107653952 non-coding upstream 235761 21844063 ~ 21852337 (-)
G38356 NA non-coding upstream 342249 21950551 ~ 21953218 (-)
G38376 NA non-coding upstream 445057 22053359 ~ 22053657 (-)
slc39a11 slc39a11,s39ab,LOC107653972,LOC107693650 other downstream 904185 20511671 ~ 20679431 (-)
c4h10orf128 NA other downstream 1757964 19818268 ~ 19825652 (-)
LOC103045068 antxrl,antxr1c,LOC108437311,LOC105893913,LOC106589351,LOC107720085 other downstream 1982332 19544225 ~ 19601284 (-)
G37616 NA other downstream 2948518 18633578 ~ 18635098 (-)
G37603 NA other downstream 3010440 18572691 ~ 18573176 (-)
G38338 g6pc,g6pca.2,LOC107682718 other upstream 265018 21873320 ~ 21878377 (-)
a1cf a1cf,LOC107654048 other upstream 405203 22013505 ~ 22038504 (-)
ube2d1 ube2d1,ube2d1b,LOC105891213,LOC107583697,LOC108431657,LOC107733527,LOC107717106,LOC107553913,LOC106607701 other upstream 1772343 23380645 ~ 23387442 (-)
LOC111192393 NA other upstream 1856917 23465219 ~ 23510619 (-)
fam13c phyhipl,phyhiplb,fam13c other upstream 2074824 23683126 ~ 23720782 (-)

Expression


Co-expression Network